RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 OVOL1O14753 267 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 CT45A10P0DMU9 189 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 PRB4P10163 310 aaPredicted RBP7.04□□□□□ -1.28
GNE-206ENST00000543356 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 KRTDAPP60985 99 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 FHL3Q13643 280 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 IZUMO1RA6ND01 250 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 CRLF1O75462 422 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 CA1P00915 261 aaPredicted RBP7.04□□□□□ -1.28
GNE-206ENST00000543356 ID1P41134 155 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 PAFAH1B2P68402 229 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 ERCC8Q13216 396 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 TMEM78Q5T7P6 136 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 Q8TAT8 98 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 DCANP1Q8TF63 244 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 ASCL2Q99929 193 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 NAT8BQ9UHF3 227 aa7.04□□□□□ -1.28
GNE-206ENST00000543356 ACANP16112 2415 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 FAM231BA6NCW3 169 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 A8MWL6 223 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 ESDP10768 282 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 CRIP1P50238 77 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 ZNF138P52744 262 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 PROK1P58294 105 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 CKS1BP61024 79 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 AGPAT4-IT1Q9H0P7 198 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 TRAPPC1Q9Y5R8 145 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 SONP18583 2426 aaKnown RBP7.03□□□□□ -1.28
GNE-206ENST00000543356 TCL1AP56279 114 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 FAM162BQ5T6X4 162 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 ADAMTSL5Q6ZMM2 481 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 RAX2Q96IS3 184 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 MS4A6AQ9H2W1 248 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 LENEPQ9Y5L5 61 aa7.03□□□□□ -1.28
GNE-206ENST00000543356 SH2D1AO60880 128 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 SRSF2Q01130 221 aaKnown RBP7.02□□□□□ -1.29
GNE-206ENST00000543356 COX19Q49B96 90 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 OR10J6PQ8NGY7 276 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 CUBNO60494 3623 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 K7EQG2 157 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 RASL11AQ6T310 242 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 NUP35Q8NFH5 326 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 DLX4Q92988 240 aaPredicted RBP7.02□□□□□ -1.29
GNE-206ENST00000543356 LINC00477Q96M19 166 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 DUX3Q96PT4 197 aa7.02□□□□□ -1.29
GNE-206ENST00000543356 IGKV3-7A0A075B6H7 116 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 TRAV2A0A0B4J234 112 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 HAX1O00165 279 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 CSN3P07498 182 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 MPV17L2Q567V2 206 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 TRBV7-9A0A0J9YWB2 115 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 CCL24O00175 119 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 ZNF80P51504 273 aaPredicted RBP7.01□□□□□ -1.29
GNE-206ENST00000543356 HERV-K104P63124 156 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 ATP5L2Q7Z4Y8 100 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 C11orf44Q8N8P7 122 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 OR8A1Q8NGG7 326 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 BAHCC1Q9P281 2608 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 HIVEP2P31629 2446 aa7.01□□□□□ -1.29
GNE-206ENST00000543356 A0A1W2PRX2 142 aa7□□□□□ -1.29
GNE-206ENST00000543356 MT-ND6P03923 174 aa7□□□□□ -1.29
GNE-206ENST00000543356 FOXA3P55318 350 aaPredicted RBP7□□□□□ -1.29
GNE-206ENST00000543356 SNRPD3P62318 126 aaKnown RBP7□□□□□ -1.29
GNE-206ENST00000543356 HIST2H2BDQ6DRA6 164 aa7□□□□□ -1.29
GNE-206ENST00000543356 RBPMS2Q6ZRY4 209 aaKnown RBP7□□□□□ -1.29
GNE-206ENST00000543356 FAM19A4Q96LR4 140 aa7□□□□□ -1.29
GNE-206ENST00000543356 Q6AWC8 147 aa7□□□□□ -1.29
GNE-206ENST00000543356 DEFB125Q8N687 156 aa7□□□□□ -1.29
GNE-206ENST00000543356 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
GNE-206ENST00000543356 NOTCH2Q04721 2471 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 MUC21A0A0G2JKD1 596 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 MUC21A0A140T8X8 626 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 A0A1B0GXF2 115 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 TMEM189A5PLL7 270 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 FABP5P3A8MUU1 101 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 HIST1H1AQ02539 215 aaPredicted RBP6.99□□□□□ -1.29
GNE-206ENST00000543356 MUC21Q5SSG8 566 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 UFSP1Q6NVU6 142 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 MRPL54Q6P161 138 aaKnown RBP6.99□□□□□ -1.29
GNE-206ENST00000543356 NEGR1Q7Z3B1 354 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 WFDC3Q8IUB2 231 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 CITED1Q99966 193 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 VCX2Q9H322 139 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 SIGLEC8Q9NYZ4 499 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 SPINK4O60575 86 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 TMEM136Q6ZRR5 245 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 APRG1Q8IVJ8 170 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 SIGMAR1Q99720 223 aa6.99□□□□□ -1.29
GNE-206ENST00000543356 FLNBO75369 2602 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms