RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 M0R2Z0 102 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 PEX7O00628 323 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 DUSP14O95147 198 aaKnown RBP7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 CRISP2P16562 243 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 FXYD7P58549 80 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 Q6ZQT7 251 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 KIR2DL5AQ8N109 375 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 OR10J6PQ8NGY7 276 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 C11orf52Q96A22 123 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 ATG101Q9BSB4 218 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
NPIPB3-210ENST00000542817 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 KLLNB2CW77 178 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 CSN1S1P47710 185 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 MEF2BQ02080 365 aaPredicted RBP7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 SPINK13Q1W4C9 94 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 ANKRD39Q53RE8 183 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 CMTM2Q8TAZ6 248 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 LINC00477Q96M19 166 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 B9D2Q9BPU9 175 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 TM2D3Q9BRN9 247 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 URGCP-MRPS24S4R325 110 aa7.77□□□□□ -1.17
NPIPB3-210ENST00000542817 TRAV12-2A0A075B6T6 113 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 DLEU1O43261 78 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 ZNF138P52744 262 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 MORN3Q6PF18 240 aaPredicted RBP7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 C1orf158Q8N1D5 194 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 TMEM75Q8N9X5 138 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 C20orf144Q9BQM9 153 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 OVOL2Q9BRP0 275 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 DERL1Q9BUN8 251 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 SNHG12Q9BXW3 62 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 RETNQ9HD89 108 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 XCL2Q9UBD3 114 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
NPIPB3-210ENST00000542817 TRBV20OR9-2A0A075B6H5 130 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 TRAV9-1A0A075B6T8 112 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 TRBV7-9A0A0J9YWB2 115 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 XKRY2A2RUG3 117 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 ZNF324O75467 553 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 CA1P00915 261 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 ESDP10768 282 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 ZNF80P51504 273 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 RNF183Q96D59 192 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 IGF2BP2-AS1Q96M15 143 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 C8orf49Q96NF6 230 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 TXNDC17Q9BRA2 123 aa7.75□□□□□ -1.17
NPIPB3-210ENST00000542817 H7BYZ3 331 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 LTAP01374 205 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 PRM2P04554 102 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 CDKN1BP46527 198 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 APOC4P55056 127 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 DEFB135Q30KP9 77 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 PDZD11Q5EBL8 140 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 TMEM78Q5T7P6 136 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 ZNF705AQ6ZN79 300 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 Q6ZWC4 215 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 Q86TA4 180 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 ZNF575Q86XF7 245 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 MLST8Q9BVC4 326 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 GOLT1BQ9Y3E0 138 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 LENEPQ9Y5L5 61 aa7.74□□□□□ -1.17
NPIPB3-210ENST00000542817 IGLV2-8P01709 118 aa7.73□□□□□ -1.17
NPIPB3-210ENST00000542817 CRIP1P50238 77 aa7.73□□□□□ -1.17
NPIPB3-210ENST00000542817 RPL23P62829 140 aaKnown RBP7.73□□□□□ -1.17
NPIPB3-210ENST00000542817 KCNIP4Q6PIL6 250 aa7.73□□□□□ -1.17
NPIPB3-210ENST00000542817 X6R8D5 127 aa7.73□□□□□ -1.17
NPIPB3-210ENST00000542817 ZNF705GA8MUZ8 300 aaPredicted RBP7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 J3KRW8 73 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 EREGO14944 169 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 PDE6DO43924 150 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 LEPP41159 167 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 Q6AWC8 147 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 PRNTQ86SH4 94 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 ZC2HC1AQ96GY0 325 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 MIEN1Q9BRT3 115 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 TP53TG1Q9Y2A0 90 aa7.72□□□□□ -1.17
NPIPB3-210ENST00000542817 C7orf71A4D174 169 aa7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 F6UZH7 168 aa7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 ZNF25P17030 456 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 RNASE4P34096 147 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 CEBPGP53567 150 aa7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 TEX43Q6ZNM6 134 aa7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 TMEM208Q9BTX3 173 aa7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 NAGKQ9UJ70 344 aa7.71□□□□□ -1.18
NPIPB3-210ENST00000542817 TRAV12-3A0A0B4J271 114 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 PGPEP1LA6NFU8 196 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 K7EQM0 130 aa7.7□□□□□ -1.18
NPIPB3-210ENST00000542817 SPRY2O43597 315 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms