RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 SND1-IT1Q9HBX3 110 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 HIST2H2BCQ6DN03 193 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 DKK2Q9UBU2 259 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 LCTP09848 1927 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 U3KQE9 123 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 SHANK1Q9Y566 2161 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 PLXNB1O43157 2135 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 JMJD7-PLA2G4BH0Y9G9 81 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 HCFC1P51610 2035 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 CYYR1Q96J86 154 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 WIPF3A6NGB9 483 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 TRBV12-3P01733 135 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 VOPP1Q96AW1 172 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 NDUFA4L2Q9NRX3 87 aa12.24□□□□□ -0.45
HMGA2-210ENST00000541363 HELZP42694 1942 aaKnown RBP12.23□□□□□ -0.45
HMGA2-210ENST00000541363 CEP290O15078 2479 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 LINC00205P59089 165 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 FOXI2Q6ZQN5 318 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 Q6ZS49 121 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 ANKRD39Q53RE8 183 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 J3QLI3 93 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 FAM231DQ6ZW35 169 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 V9GYV3 84 aa12.23□□□□□ -0.45
HMGA2-210ENST00000541363 Q6ZVH6 145 aa12.22□□□□□ -0.45
HMGA2-210ENST00000541363 IGLV3-19P01714 112 aa12.22□□□□□ -0.45
HMGA2-210ENST00000541363 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
HMGA2-210ENST00000541363 DAZ4Q86SG3 579 aaKnown RBP12.22□□□□□ -0.45
HMGA2-210ENST00000541363 ZC2HC1AQ96GY0 325 aa12.22□□□□□ -0.45
HMGA2-210ENST00000541363 DAZ3Q9NR90 486 aaKnown RBP12.22□□□□□ -0.45
HMGA2-210ENST00000541363 FREM1Q5H8C1 2179 aa12.22□□□□□ -0.45
HMGA2-210ENST00000541363 IGHV7-4-1A0A0J9YVY3 117 aa12.22□□□□□ -0.45
HMGA2-210ENST00000541363 TMEM256-PLSCR3K7ERE1 68 aa12.21□□□□□ -0.45
HMGA2-210ENST00000541363 CCL25O15444 150 aa12.21□□□□□ -0.45
HMGA2-210ENST00000541363 DENND4AQ7Z401 1863 aa12.21□□□□□ -0.45
HMGA2-210ENST00000541363 NCR3O14931 201 aa12.21□□□□□ -0.46
HMGA2-210ENST00000541363 SP5Q6BEB4 398 aaPredicted RBP12.21□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV2-70DA0A0C4DH43 119 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 ZNF833PQ6ZTB9 187 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 NHSL1Q5SYE7 1610 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 G3V318 75 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
HMGA2-210ENST00000541363 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 KIR2DL5BA0A0G2JN68 375 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 KIR2DL5BA0A0G2JPC4 375 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 KIR2DL5AQ8N109 375 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 A0A087WW49 117 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 MPLKIPQ8TAP9 179 aa12.2□□□□□ -0.46
HMGA2-210ENST00000541363 C16orf74Q96GX8 76 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 IGLV2-23P01705 113 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 C17orf77Q96MU5 243 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 LY6HO94772 140 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 E7EQL1 145 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 PLXNA3P51805 1871 aa12.19□□□□□ -0.46
HMGA2-210ENST00000541363 K7EQD1 137 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 CRYGBP07316 175 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 GYPEP15421 78 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 EP300Q09472 2414 aaPredicted RBP12.18□□□□□ -0.46
HMGA2-210ENST00000541363 PNRC2Q9NPJ4 139 aaKnown RBP12.18□□□□□ -0.46
HMGA2-210ENST00000541363 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
HMGA2-210ENST00000541363 UBR3Q6ZT12 1888 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 A0A0G2JRQ6 117 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 TICRRQ7Z2Z1 1910 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 LYPD3O95274 346 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 DIRC1Q969H9 104 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 NDUFA1O15239 70 aa12.18□□□□□ -0.46
HMGA2-210ENST00000541363 IGLV10-54A0A075B6I4 117 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 ATP5G1P05496 136 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 C3orf22Q8N5N4 141 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 Q0VFX4 171 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 DUX4L9Q6RFH8 374 aaPredicted RBP12.17□□□□□ -0.46
HMGA2-210ENST00000541363 WDR86Q86TI4 376 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 ADCYAP1P18509 176 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 MAPK1IP1LQ8NDC0 245 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 FAM110AQ9BQ89 295 aa12.17□□□□□ -0.46
HMGA2-210ENST00000541363 C9orf66Q5T8R8 295 aa12.16□□□□□ -0.46
HMGA2-210ENST00000541363 RNF152Q8N8N0 203 aa12.16□□□□□ -0.46
HMGA2-210ENST00000541363 OBSL1O75147 1896 aa12.16□□□□□ -0.46
HMGA2-210ENST00000541363 FRMPD3Q5JV73 1810 aa12.16□□□□□ -0.46
HMGA2-210ENST00000541363 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
HMGA2-210ENST00000541363 K7EM74 188 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 GNRH2O43555 120 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 PDE6GP18545 87 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 COL6A6A6NMZ7 2263 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 FAM240AA0A1B0GVK7 77 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 CCL24O00175 119 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms