RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
CACFD1-206ENST00000540581 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
CACFD1-206ENST00000540581 C20orf173Q96LM9 149 aa12.18□□□□□ -0.46
CACFD1-206ENST00000540581 BRD3OSQ6XYD6 125 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 NRACQ8N912 160 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 PSMG3-AS1Q96PY0 264 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 SIRPDQ9H106 197 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 TEX48A0A1B0GUV7 120 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 Q5PR19 223 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 C11orf71Q6IPW1 123 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 EEF1AKMT3Q96AZ1 226 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 SLC50A1Q9BRV3 221 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
CACFD1-206ENST00000540581 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACFD1-206ENST00000540581 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 G3V4G9 280 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 EMP1P54849 157 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 LY6EQ16553 131 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 MINOS1Q5TGZ0 78 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 UNQ9165/PRO28630Q6UXU0 137 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 CLUHP3Q96NS8 147 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 MINOS1-NBL1R4GNA1 71 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 ATP5LO75964 103 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
CACFD1-206ENST00000540581 EBI3Q14213 229 aa12.15□□□□□ -0.46
CACFD1-206ENST00000540581 CEND1Q8N111 149 aa12.15□□□□□ -0.46
CACFD1-206ENST00000540581 ATP5G2Q06055 141 aa12.15□□□□□ -0.46
CACFD1-206ENST00000540581 H3BMG7 143 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 NBL1P41271 181 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 TMEM190Q8WZ59 177 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 CYSLTR1Q9Y271 337 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.14□□□□□ -0.47
CACFD1-206ENST00000540581 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACFD1-206ENST00000540581 WFDC2Q14508 124 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 AJUBAQ96IF1 538 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
CACFD1-206ENST00000540581 GNRH2O43555 120 aa12.13□□□□□ -0.47
CACFD1-206ENST00000540581 RNASE4P34096 147 aaKnown RBP12.13□□□□□ -0.47
CACFD1-206ENST00000540581 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
CACFD1-206ENST00000540581 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
CACFD1-206ENST00000540581 CENPVL3A0A0U1RRI6 287 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 CSMD2Q7Z408 3487 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 A0A087WX48 190 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 OOSP1A8MZH6 123 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 ARL3P36405 182 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 UBE2E1P51965 193 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 SCGB2A2Q13296 93 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 FBXL19-AS1Q494R0 122 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 CRYBG3Q68DQ2 2970 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 ZNF479Q96JC4 524 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 PHLDA3Q9Y5J5 127 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
CACFD1-206ENST00000540581 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
CACFD1-206ENST00000540581 NPFFO15130 113 aa12.11□□□□□ -0.47
CACFD1-206ENST00000540581 RAB9AP51151 201 aa12.11□□□□□ -0.47
CACFD1-206ENST00000540581 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
CACFD1-206ENST00000540581 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
CACFD1-206ENST00000540581 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
CACFD1-206ENST00000540581 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
CACFD1-206ENST00000540581 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
CACFD1-206ENST00000540581 IGLL5B9A064 214 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 C12orf74Q32Q52 190 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 TRAV41A0A0B4J266 112 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 EDN2P20800 178 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 ETDBQ3ZM63 59 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 C1orf122Q6ZSJ8 110 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 HIGD1BQ9P298 99 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 ZFYVE26Q68DK2 2539 aa12.1□□□□□ -0.47
CACFD1-206ENST00000540581 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 RASL10AQ92737 203 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 JPT2Q9H910 190 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 SORL1Q92673 2214 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 OR11H12B2RN74 326 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
CACFD1-206ENST00000540581 C9orf47Q6ZRZ4 202 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 OR11H1Q8NG94 326 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 OR11H2Q8NH07 326 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
CACFD1-206ENST00000540581 LINC01546A6NGU7 62 aa12.08□□□□□ -0.47
CACFD1-206ENST00000540581 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.47
CACFD1-206ENST00000540581 PIEZO1Q92508 2521 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 DOPEY2Q9Y3R5 2298 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 LY6DQ14210 128 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 CD300EQ496F6 205 aaPredicted RBP12.08□□□□□ -0.48
CACFD1-206ENST00000540581 C2orf66Q6UXQ4 117 aa12.08□□□□□ -0.48
CACFD1-206ENST00000540581 F8VRH5 84 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 H7C1H1 209 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 PF4V1P10720 104 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 SCGB1D4Q6XE38 83 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 TM2D2Q9BX73 214 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 ASIPP42127 132 aa12.07□□□□□ -0.48
CACFD1-206ENST00000540581 ZFAND2AQ8N6M9 145 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms