RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 LGALS9BQ3B8N2 356 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 C10orf99Q6UWK7 81 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 TMEM158Q8WZ71 300 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 ATP6V0BQ99437 205 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 CENPEQ02224 2701 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 POLQO75417 2590 aa8.74□□□□□ -1.01
C11orf54-214ENST00000540113 FGF6P10767 208 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 NMUP48645 174 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 FBN2P35556 2912 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 A0A096LNT2 108 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 B4DSR2 109 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 M0R381 172 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 OR2K2Q8NGT1 345 aa8.73□□□□□ -1.01
C11orf54-214ENST00000540113 NDUFA4O00483 81 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 RNASE4P34096 147 aaKnown RBP8.72□□□□□ -1.01
C11orf54-214ENST00000540113 VAMP3Q15836 100 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 C9orf139Q6ZV77 190 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 MRPL53Q96EL3 112 aaKnown RBP8.72□□□□□ -1.01
C11orf54-214ENST00000540113 ZNF462Q96JM2 2506 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 SOCS3O14543 225 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 BRI3O95415 125 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 PPBPP02775 128 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 PRSS1P07477 247 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 FCER1GP30273 86 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 ODF1Q14990 250 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 RHPN1-AS1Q9BWJ2 59 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 NPFFR1Q9GZQ6 430 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 PPP1R14DQ9NXH3 145 aa8.72□□□□□ -1.01
C11orf54-214ENST00000540113 GNRH2O43555 120 aa8.71□□□□□ -1.01
C11orf54-214ENST00000540113 UBE2V1Q13404 147 aa8.71□□□□□ -1.01
C11orf54-214ENST00000540113 C12orf54Q6X4T0 127 aa8.71□□□□□ -1.01
C11orf54-214ENST00000540113 NRACQ8N912 160 aa8.71□□□□□ -1.01
C11orf54-214ENST00000540113 OR10J6PQ8NGY7 276 aa8.71□□□□□ -1.01
C11orf54-214ENST00000540113 FOXC2Q99958 501 aa8.71□□□□□ -1.01
C11orf54-214ENST00000540113 IGLV2-18A0A075B6J9 118 aa8.71□□□□□ -1.02
C11orf54-214ENST00000540113 H3BUA1 57 aa8.71□□□□□ -1.02
C11orf54-214ENST00000540113 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
C11orf54-214ENST00000540113 CFHR3Q02985 330 aa8.71□□□□□ -1.02
C11orf54-214ENST00000540113 ANXA2RQ3ZCQ2 193 aa8.71□□□□□ -1.02
C11orf54-214ENST00000540113 DEFB125Q8N687 156 aa8.71□□□□□ -1.02
C11orf54-214ENST00000540113 IGKV2D-26A0A0A0MRZ7 120 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 A1L4Q6 167 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 C7orf71A4D174 169 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 IGHV4-59P01825 116 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 DSCR9P59020 149 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 Q8N8P6 123 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 NAA38Q9BRA0 125 aaKnown RBP8.7□□□□□ -1.02
C11orf54-214ENST00000540113 NXT2Q9NPJ8 142 aaKnown RBP8.7□□□□□ -1.02
C11orf54-214ENST00000540113 UBR5O95071 2799 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-214ENST00000540113 DOPEY2Q9Y3R5 2298 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 ANKRD17O75179 2603 aaKnown RBP8.7□□□□□ -1.02
C11orf54-214ENST00000540113 CD5LO43866 347 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 SLC25A16P16260 332 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 TMEM97Q5BJF2 176 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 C14orf178Q8N769 122 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-214ENST00000540113 USMG5Q96IX5 58 aa8.7□□□□□ -1.02
C11orf54-214ENST00000540113 SMIM17P0DL12 118 aa8.69□□□□□ -1.02
C11orf54-214ENST00000540113 S100A4P26447 101 aaKnown RBP8.69□□□□□ -1.02
C11orf54-214ENST00000540113 AMMECR1LQ6DCA0 310 aa8.69□□□□□ -1.02
C11orf54-214ENST00000540113 RPL39LQ96EH5 51 aaKnown RBP8.69□□□□□ -1.02
C11orf54-214ENST00000540113 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
C11orf54-214ENST00000540113 DEFB112Q30KQ8 113 aa8.69□□□□□ -1.02
C11orf54-214ENST00000540113 GTSCR1Q86UQ5 136 aa8.69□□□□□ -1.02
C11orf54-214ENST00000540113 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
C11orf54-214ENST00000540113 LINC00477Q96M19 166 aa8.69□□□□□ -1.02
C11orf54-214ENST00000540113 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 LINC01546A6NGU7 62 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 MGPP08493 103 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 GATA3P23771 443 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 LINC01356Q8N9X3 169 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 OVOL1O14753 267 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 OR4C5Q8NGB2 326 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 OR1N2Q8NGR9 330 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
C11orf54-214ENST00000540113 FAM208BQ5VWN6 2430 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 LRRK2Q5S007 2527 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 TRAV21A0A0B4J279 112 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 KRTAP10-9P60411 292 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 LAGE3Q14657 143 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
C11orf54-214ENST00000540113 HHLA3Q9XRX5 114 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 PHLDA3Q9Y5J5 127 aa8.67□□□□□ -1.02
C11orf54-214ENST00000540113 K7EP13 123 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 NEGR1Q7Z3B1 354 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 DAZ1Q9NQZ3 744 aaKnown RBP8.66□□□□□ -1.02
C11orf54-214ENST00000540113 MUC4Q99102 2169 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 CR1P17927 2039 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 IGHV4-4A0A075B6R2 117 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 ASIPP42127 132 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 RASL10AQ92737 203 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 DPF1Q92782 380 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 RAB37Q96AX2 223 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 DUX5Q96PT3 197 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms