RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RPL39LQ96EH5 51 aaKnown RBP10.65□□□□□ -0.7
SCNN1A-215ENST00000540037 ZNF502Q8TBZ5 544 aa10.65□□□□□ -0.71
SCNN1A-215ENST00000540037 C20orf78Q9BR46 151 aa10.65□□□□□ -0.71
SCNN1A-215ENST00000540037 M0R381 172 aa10.64□□□□□ -0.71
SCNN1A-215ENST00000540037 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
SCNN1A-215ENST00000540037 CCDC140Q96MF4 163 aa10.64□□□□□ -0.71
SCNN1A-215ENST00000540037 PRTN3P24158 256 aa10.64□□□□□ -0.71
SCNN1A-215ENST00000540037 IGF2-ASQ6U949 168 aa10.64□□□□□ -0.71
SCNN1A-215ENST00000540037 Q8N6K4 173 aa10.64□□□□□ -0.71
SCNN1A-215ENST00000540037 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 A0A1B0GWB2 263 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 F8VRH5 84 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 C8orf86Q6ZUL3 223 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 Q8N9W7 124 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 ATP6V0E1O15342 81 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 LGALS1P09382 135 aaKnown RBP10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 PLNP26678 52 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 CDSNQ15517 529 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 PSMG4Q5JS54 123 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 SCGB3A1Q96QR1 104 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 PGPEP1Q9NXJ5 209 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 OR11H12B2RN74 326 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 H7C1H1 209 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 EMP1P54849 157 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 OR11H2Q8NH07 326 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
SCNN1A-215ENST00000540037 PTPRZ1P23471 2315 aaPredicted RBP10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 C14orf178Q8N769 122 aaPredicted RBP10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 KLHL30-AS1Q8NEE0 82 aa10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 ZFP36P26651 326 aaKnown RBP10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 SMCPP49901 116 aaPredicted RBP10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 TAL2Q16559 108 aa10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 RASL10AQ92737 203 aa10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 VKORC1Q9BQB6 163 aa10.62□□□□□ -0.71
SCNN1A-215ENST00000540037 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 ZFP2Q6ZN57 461 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 PTH2Q96A98 100 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 MAP1AP78559 2803 aaPredicted RBP10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 C20orf173Q96LM9 149 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 PRADC1Q9BSG0 188 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 LINC00527Q9UJ94 153 aa10.61□□□□□ -0.71
SCNN1A-215ENST00000540037 NDUFS8O00217 210 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 MRPL16Q9NX20 251 aaKnown RBP10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 RAXQ9Y2V3 346 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 ATRXP46100 2492 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 J3QR89 54 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 HOXA3O43365 443 aaPredicted RBP10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 ATP6V0BQ99437 205 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 HIF1ANQ9NWT6 349 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 APOMO95445 188 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
SCNN1A-215ENST00000540037 SCGB2A1O75556 95 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 SLC25A16P16260 332 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 SCGB2A2Q13296 93 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 FHL3Q13643 280 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 GLMPQ8WWB7 406 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 ZNF815PA8K554 130 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 M0R1W7 72 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 TGFAP01135 160 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 MGPP08493 103 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 TOMM6Q96B49 74 aa10.59□□□□□ -0.71
SCNN1A-215ENST00000540037 RAB9AP51151 201 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 C2orf66Q6UXQ4 117 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 SCGB1A1P11684 91 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 PSMB2P49721 201 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 SCGB1D4Q6XE38 83 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 FAM110DQ8TAY7 271 aaPredicted RBP10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 C9orf47Q6ZRZ4 202 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
SCNN1A-215ENST00000540037 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 EBI3Q14213 229 aa10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 F6UB75 175 aa10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 FOXI1Q12951 378 aa10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 METTL26Q96S19 204 aa10.57□□□□□ -0.72
SCNN1A-215ENST00000540037 GNRH2O43555 120 aa10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 DUSP14O95147 198 aaKnown RBP10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 TSPAN13O95857 204 aa10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 CKS1BP61024 79 aa10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms