RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 RAB14P61106 215 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 FAM74A1Q5RGS3 127 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 MORN5Q5VZ52 161 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 Q6ZSA8 131 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 OR2G3Q8NGZ4 309 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 PCNPQ8WW12 178 aaKnown RBP7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 PSMG3Q9BT73 122 aaPredicted RBP7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 NPCDR1Q9BY65 106 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 TIMM9Q9Y5J7 89 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 LRP1Q07954 4544 aaKnown RBP7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
CLSTN3-209ENST00000539982 TRAV5A0A0B4J249 113 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 C17orf112F2Z3M2 114 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 ZNF253O75346 499 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 GPX1P07203 203 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 NMBP08949 121 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 GYPEP15421 78 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 RAB31Q13636 194 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 MGST2Q99735 147 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 TXNDC17Q9BRA2 123 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 AGPAT4-IT1Q9H0P7 198 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 DNAJC4Q9NNZ3 241 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 KCNIP2Q9NS61 270 aa7.75□□□□□ -1.17
CLSTN3-209ENST00000539982 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 IGHV3-38A0A0C4DH36 116 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 UMAD1C9J7I0 102 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 CRISP2P16562 243 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 SULT1A2P50226 295 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 RAB5CP51148 216 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 SERF2P84101 59 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 AKR1C8PQ5T2L2 129 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 ZNF479Q96JC4 524 aa7.74□□□□□ -1.17
CLSTN3-209ENST00000539982 M0R3E3 92 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 SFTA3P0C7M3 94 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 CAMLGP49069 296 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 CLLU1Q5K131 121 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 OR10G4Q8NGN3 311 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 PRELID1Q9Y255 219 aa7.73□□□□□ -1.17
CLSTN3-209ENST00000539982 TRBV19A0A075B6N1 114 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 C9JCJ5 164 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 MBP02144 154 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 RPL29P47914 159 aaKnown RBP7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 TIRAPP58753 221 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 FFAR4Q5NUL3 377 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 DPPA3Q6W0C5 159 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 Q6ZQT7 251 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 Q6ZRG5 221 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 C9orf47Q6ZRZ4 202 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 SH2D6Q7Z4S9 175 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 ZFAND2AQ8N6M9 145 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 BLNKQ8WV28 456 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 RASL10AQ92737 203 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 Q9HAA7 133 aa7.72□□□□□ -1.17
CLSTN3-209ENST00000539982 KRTAP10-4P60372 401 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 BLOC1S1P78537 153 aa7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 ACOT6Q3I5F7 207 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 PRR9Q5T870 116 aa7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 MIC13Q5XKP0 118 aa7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 FAM213BQ8TBF2 198 aa7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 SLC39A9Q9NUM3 307 aa7.71□□□□□ -1.18
CLSTN3-209ENST00000539982 NDUFB4O95168 129 aa7.7□□□□□ -1.18
CLSTN3-209ENST00000539982 NDUFA5Q16718 116 aa7.7□□□□□ -1.18
CLSTN3-209ENST00000539982 TMEM78Q5T7P6 136 aa7.7□□□□□ -1.18
CLSTN3-209ENST00000539982 OR1L4Q8NGR5 311 aa7.7□□□□□ -1.18
CLSTN3-209ENST00000539982 SPXQ9BT56 116 aa7.7□□□□□ -1.18
CLSTN3-209ENST00000539982 TM2D2Q9BX73 214 aa7.7□□□□□ -1.18
CLSTN3-209ENST00000539982 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 HIST1H1EP10412 219 aaKnown RBP7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 FHITP49789 147 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 PPT1P50897 306 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 RAB2AP61019 212 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 PDE6HQ13956 83 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 WFDC2Q14508 124 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 EXOC3-AS1Q8N2X6 119 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 OR10G7Q8NGN6 311 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 PFDN5Q99471 154 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 ACTR3CQ9C0K3 210 aaPredicted RBP7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 TMEM14CQ9P0S9 112 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 ZNF492Q9P255 531 aa7.69□□□□□ -1.18
CLSTN3-209ENST00000539982 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 TRAV4A0A0B4J268 109 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 LINC00862A6NCI5 91 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 FAM122CQ6P4D5 195 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 NHLRC2Q8NBF2 726 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 OR4C5Q8NGB2 326 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 AAMDCQ9H7C9 122 aa7.68□□□□□ -1.18
CLSTN3-209ENST00000539982 IGKV2-40A0A087WW87 121 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 TRBV7-9A0A0J9YWB2 115 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 A0A1W2PPV4 95 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 TEX46H3BTG2 121 aa7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 IGKV2D-40P01614 121 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-209ENST00000539982 IGHV3-30P01768 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms