RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 A0A1B0GXF2 115 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 OR4C46A6NHA9 309 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 C2orf70A6NJV1 201 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 GGTLC3B5MD39 225 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 K7EQM0 130 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 P01737 135 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 CD7P09564 240 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 CT45A6P0DMU7 189 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 CT45A5P0DMU8 189 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 CT45A7P0DMV0 189 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 BMI1P35226 326 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 HINT1P49773 126 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 PLP1P60201 277 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 NDPQ00604 133 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 HIST1H1AQ02539 215 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 FXYD3Q14802 87 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 VMA21Q3ZAQ7 101 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 CD300EQ496F6 205 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 Q6AWC8 147 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 RBPMS2Q6ZRY4 209 aaKnown RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 SPATA12Q7Z6I5 190 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 LYPD1Q8N2G4 141 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 C5orf17Q8NAS9 161 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 FAM167A-AS1Q96KT0 104 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 TRGV9Q99603 122 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 SLC25A2Q9BXI2 301 aa4.46□□□□□ -1.7
CPSF7-219ENST00000539952 MRPL20Q9BYC9 149 aaKnown RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 RPP21Q9H633 154 aaKnown RBP4.46□□□□□ -1.7
CPSF7-219ENST00000539952 A0A0J9YWU9 116 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 PGPA6NDG6 321 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 FBLL1A6NHQ2 334 aaKnown RBP4.45□□□□□ -1.7
CPSF7-219ENST00000539952 HIGD1CA8MV81 97 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 F2Z2F3 143 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 SYS1-DBNDD2H3BUS1 97 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 K7ERU9 68 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 CHEK1O14757 476 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 SIVA1O15304 175 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 CCL25O15444 150 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 SPINK4O60575 86 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 PPBPP02775 128 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 SLC25A5P05141 298 aaKnown RBP4.45□□□□□ -1.7
CPSF7-219ENST00000539952 NBEAP1P0C6P0 100 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 S100A7P31151 101 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 CSN1S1P47710 185 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 TFPI2P48307 235 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 TCL1AP56279 114 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 TCTAP57738 103 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 LINC00205P59089 165 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 SEC11AP67812 179 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 SLAQ13239 276 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 RIGQ13278 110 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 VAMP3Q15836 100 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 RNASEKQ6P5S7 137 aaKnown RBP4.45□□□□□ -1.7
CPSF7-219ENST00000539952 LINC00336Q6ZUF6 198 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 VKORC1L1Q8N0U8 176 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 Q8N3U1 123 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 TEX45Q8NA69 505 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 GATD1Q8NB37 220 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 MLST8Q9BVC4 326 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 TP53TG1Q9Y2A0 90 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 WASHC3Q9Y3C0 194 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 X6R8D5 127 aa4.45□□□□□ -1.7
CPSF7-219ENST00000539952 MUC4Q99102 2169 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 IGKV1OR2-108A0A075B7D4 117 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 SERTM2A0A1B0GWG4 89 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 C19orf71A6NCJ1 209 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 A6NDN8 102 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 SPRY2O43597 315 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 LTAP01374 205 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 SAA1P0DJI8 122 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-219ENST00000539952 RBX1P62877 108 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 Q56UQ5 140 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 PVRIGQ6DKI7 326 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 EBLN2Q6P2I7 272 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 LINC00305Q7Z4B0 112 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 OR10AG1Q8NH19 301 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 DYNLRB2Q8TF09 96 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
CPSF7-219ENST00000539952 FXYD5Q96DB9 178 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 HARBI1Q96MB7 349 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 AP1S3Q96PC3 154 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 SRSF8Q9BRL6 282 aaKnown RBP4.44□□□□□ -1.7
CPSF7-219ENST00000539952 OTORQ9NRC9 128 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 TMEM14CQ9P0S9 112 aa4.44□□□□□ -1.7
CPSF7-219ENST00000539952 SRRM4A7MD48 611 aaKnown RBP4.43□□□□□ -1.7
CPSF7-219ENST00000539952 NPIPB6E9PJ23 425 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 LGALS9O00182 355 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 NUDT3O95989 172 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 CRYGCP07315 174 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 CAMPP49913 170 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 APOC4P55056 127 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 ATP5G2Q06055 141 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 PRR27Q6MZM9 219 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 PATE2Q6UY27 113 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 TMEM116Q8NCL8 245 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms