RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SIGLEC15Q6ZMC9 328 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 A0A1B0GW15 77 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 TMEM97Q5BJF2 176 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 FA2HQ7L5A8 372 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 TMEM190Q8WZ59 177 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 MTORP42345 2549 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 DNAJC9-AS1A6NH13 148 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 METTL26Q96S19 204 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 ESM1Q9NQ30 184 aa13.05□□□□□ -0.32
PCDHB17P-201ENST00000539533 K7EQM0 130 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 CSN1S1P47710 185 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 SEC11AP67812 179 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 UFSP1Q6NVU6 142 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 GTF2H5Q6ZYL4 71 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 TMEM86BQ8N661 226 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 OR10AG1Q8NH19 301 aa13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
PCDHB17P-201ENST00000539533 CRIP1P50238 77 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 PSG3Q16557 428 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 Q8N2B8 174 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 TPPP3Q9BW30 176 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 G3V4G9 280 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 NCR2O95944 276 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 Q6AWC8 147 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
PCDHB17P-201ENST00000539533 TMEM89A2RUT3 159 aa13.02□□□□□ -0.32
PCDHB17P-201ENST00000539533 M0R3E3 92 aa13.02□□□□□ -0.32
PCDHB17P-201ENST00000539533 NDUFA4O00483 81 aa13.02□□□□□ -0.32
PCDHB17P-201ENST00000539533 JMJD8Q96S16 334 aa13.02□□□□□ -0.32
PCDHB17P-201ENST00000539533 U3KQE9 123 aa13.02□□□□□ -0.32
PCDHB17P-201ENST00000539533 CIDEAO60543 219 aa13.02□□□□□ -0.33
PCDHB17P-201ENST00000539533 PDE6HQ13956 83 aa13.02□□□□□ -0.33
PCDHB17P-201ENST00000539533 NAA38Q9BRA0 125 aaKnown RBP13.02□□□□□ -0.33
PCDHB17P-201ENST00000539533 C9orf118A6NHY6 69 aa13.01□□□□□ -0.33
PCDHB17P-201ENST00000539533 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
PCDHB17P-201ENST00000539533 H3BUT2 72 aa13.01□□□□□ -0.33
PCDHB17P-201ENST00000539533 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
PCDHB17P-201ENST00000539533 FAM106AQ4KMX7 169 aa13.01□□□□□ -0.33
PCDHB17P-201ENST00000539533 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
PCDHB17P-201ENST00000539533 ELANEP08246 267 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 A0A096LNJ9 63 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 H3BRM9 83 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 LY6G6DO95868 133 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 Q6ZSV7 163 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 C8orf49Q96NF6 230 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
PCDHB17P-201ENST00000539533 A6NDN8 102 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 K7EP34 96 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 MYOZ3Q8TDC0 251 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 D6R8Y8 96 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 OR8A1Q8NGG7 326 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 SIGLEC8Q9NYZ4 499 aa12.99□□□□□ -0.33
PCDHB17P-201ENST00000539533 LOC389332A0A1B0GUA5 103 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 TM4SF20Q53R12 229 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 U3KQK5 164 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 FGF6P10767 208 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 RNF152Q8N8N0 203 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 DPF1Q92782 380 aa12.98□□□□□ -0.33
PCDHB17P-201ENST00000539533 TMSB15BA0A087X1C1 80 aa12.97□□□□□ -0.33
PCDHB17P-201ENST00000539533 TMEM213A2RRL7 107 aa12.97□□□□□ -0.33
PCDHB17P-201ENST00000539533 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
PCDHB17P-201ENST00000539533 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
PCDHB17P-201ENST00000539533 PRELID3AQ96N28 172 aa12.97□□□□□ -0.33
PCDHB17P-201ENST00000539533 SRD5A1P18405 259 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 EDN2P20800 178 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 FAM104BQ5XKR9 115 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 AMN1Q8IY45 258 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 GLMPQ8WWB7 406 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 UBE2E2Q96LR5 201 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 TMEM160Q9NX00 188 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 TMEM189A5PLL7 270 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 TCTAP57738 103 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 RAB37Q96AX2 223 aa12.96□□□□□ -0.33
PCDHB17P-201ENST00000539533 SH2D1AO60880 128 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 LGALS1P09382 135 aaKnown RBP12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 LGALS9BQ3B8N2 356 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 LGALS9CQ6DKI2 356 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 HIST2H2BDQ6DRA6 164 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 C18orf65Q6ZTR6 163 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 NEGR1Q7Z3B1 354 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 GPHB5Q86YW7 130 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 ORMDL3Q8N138 153 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 RNF182Q8N6D2 247 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
PCDHB17P-201ENST00000539533 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
PCDHB17P-201ENST00000539533 IGHV4OR15-8A0A075B7B6 117 aa12.94□□□□□ -0.34
PCDHB17P-201ENST00000539533 A0A087WW49 117 aa12.94□□□□□ -0.34
PCDHB17P-201ENST00000539533 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
PCDHB17P-201ENST00000539533 IGKV2-40A0A087WW87 121 aaPredicted RBP12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 IGHV7-4-1A0A0J9YVY3 117 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms