RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SEC11BP0C7V7 166 aa9.16□□□□□ -0.94
PRKDC-206ENST00000536429 TDRG1Q3Y452 100 aa9.16□□□□□ -0.94
PRKDC-206ENST00000536429 TCTE3Q8IZS6 198 aa9.16□□□□□ -0.94
PRKDC-206ENST00000536429 FAM213BQ8TBF2 198 aa9.16□□□□□ -0.94
PRKDC-206ENST00000536429 hCG_2014768A0A024R1R8 64 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 TRGV11A0A075B6L2 103 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 K7EQM0 130 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 PFDN1O60925 122 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 GCGP01275 180 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 LGALS9BQ3B8N2 356 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 LGALSLQ3ZCW2 172 aaPredicted RBP9.15□□□□□ -0.94
PRKDC-206ENST00000536429 RNF212Q495C1 297 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
PRKDC-206ENST00000536429 PKD1P98161 4303 aa9.15□□□□□ -0.95
PRKDC-206ENST00000536429 MUC4Q99102 2169 aa9.14□□□□□ -0.95
PRKDC-206ENST00000536429 SFTA3P0C7M3 94 aa9.14□□□□□ -0.95
PRKDC-206ENST00000536429 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
PRKDC-206ENST00000536429 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
PRKDC-206ENST00000536429 ARL2-SNX15V9GYD0 113 aa9.14□□□□□ -0.95
PRKDC-206ENST00000536429 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 UMAD1C9J7I0 102 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 TPT1P13693 172 aaKnown RBP9.13□□□□□ -0.95
PRKDC-206ENST00000536429 FHL2Q14192 279 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 Q6ZR54 194 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 Q86TA4 180 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 STOML3Q8TAV4 291 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 RASL10AQ92737 203 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 ZNF479Q96JC4 524 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
PRKDC-206ENST00000536429 A0A096LPF7 62 aa9.12□□□□□ -0.95
PRKDC-206ENST00000536429 PAGE4O60829 102 aa9.12□□□□□ -0.95
PRKDC-206ENST00000536429 PFN1P07737 140 aaKnown RBP9.12□□□□□ -0.95
PRKDC-206ENST00000536429 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
PRKDC-206ENST00000536429 SPXQ9BT56 116 aa9.12□□□□□ -0.95
PRKDC-206ENST00000536429 NKX6-2Q9C056 277 aaPredicted RBP9.12□□□□□ -0.95
PRKDC-206ENST00000536429 H3BNG1 76 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 RTL8CO15255 209 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 C1QBP02746 253 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 CRIP1P50238 77 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 CCL18P55774 89 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 EIF5AP63241 154 aaKnown RBP9.11□□□□□ -0.95
PRKDC-206ENST00000536429 CCL20P78556 96 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 ESRGQ1W209 222 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 SAPCD1Q5SSQ6 148 aa9.11□□□□□ -0.95
PRKDC-206ENST00000536429 HERC2O95714 4834 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 FBLL1A6NHQ2 334 aaKnown RBP9.1□□□□□ -0.95
PRKDC-206ENST00000536429 M0R2P5 195 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 PAX4O43316 350 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 PPT1P50897 306 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 CRYBA4P53673 196 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 FAM3BP58499 235 aaPredicted RBP9.1□□□□□ -0.95
PRKDC-206ENST00000536429 ZFP69Q49AA0 526 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 DPPA3Q6W0C5 159 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 ZC2HC1AQ96GY0 325 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
PRKDC-206ENST00000536429 A0A1B0GVG6 124 aa9.09□□□□□ -0.95
PRKDC-206ENST00000536429 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
PRKDC-206ENST00000536429 RNASE3P12724 160 aaKnown RBP9.09□□□□□ -0.95
PRKDC-206ENST00000536429 AKAP14Q86UN6 197 aa9.09□□□□□ -0.95
PRKDC-206ENST00000536429 C9orf85Q96MD7 179 aa9.09□□□□□ -0.95
PRKDC-206ENST00000536429 PRO0255Q9UI72 69 aa9.09□□□□□ -0.95
PRKDC-206ENST00000536429 HHLA3Q9XRX5 114 aa9.09□□□□□ -0.95
PRKDC-206ENST00000536429 TRAV4A0A0B4J268 109 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 TRGV4A0A0C4DH28 118 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 C9JCJ5 164 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 AKR1C3P42330 323 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 C9orf62Q8N4C0 152 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 NHLRC2Q8NBF2 726 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 FMC1Q96HJ9 113 aa9.08□□□□□ -0.96
PRKDC-206ENST00000536429 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 FABP5P3A8MUU1 101 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 SH2D1AO60880 128 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 LTAP01374 205 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 UBE2G1P62253 170 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 COX8CQ7Z4L0 72 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 OR4C5Q8NGB2 326 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 TCEAL7Q9BRU2 100 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 KRTAP1-5Q9BYS1 174 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
PRKDC-206ENST00000536429 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 M0R036 132 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 SULT1A2P50226 295 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 SLC51BQ86UW2 128 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 Q9H8V8 135 aa9.06□□□□□ -0.96
PRKDC-206ENST00000536429 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms