RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
CHD4-203ENST00000535717 Q6ZQT7 251 aa8.67□□□□□ -1.02
CHD4-203ENST00000535717 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
CHD4-203ENST00000535717 PRNTQ86SH4 94 aa8.67□□□□□ -1.02
CHD4-203ENST00000535717 IL17DQ8TAD2 202 aa8.67□□□□□ -1.02
CHD4-203ENST00000535717 NIPSNAP3BQ9BS92 247 aa8.67□□□□□ -1.02
CHD4-203ENST00000535717 FBLL1A6NHQ2 334 aaKnown RBP8.66□□□□□ -1.02
CHD4-203ENST00000535717 F6UZH7 168 aa8.66□□□□□ -1.02
CHD4-203ENST00000535717 EMP1P54849 157 aa8.66□□□□□ -1.02
CHD4-203ENST00000535717 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
CHD4-203ENST00000535717 RPS10P5Q9NQ39 176 aa8.66□□□□□ -1.02
CHD4-203ENST00000535717 KLF12Q9Y4X4 402 aa8.66□□□□□ -1.02
CHD4-203ENST00000535717 TENM2Q9NT68 2774 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 TMEM189A5PLL7 270 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 IFNA1P01562 189 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 Q6AWC8 147 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 Q86TA4 180 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 MUC7Q8TAX7 377 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 C8orf49Q96NF6 230 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 PYGO2Q9BRQ0 406 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 NDFIP1Q9BT67 221 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 CELA1Q9UNI1 258 aa8.65□□□□□ -1.02
CHD4-203ENST00000535717 A0A1B0GV90 55 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 PLAC8L1A1L4L8 177 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 IFITM10A6NMD0 228 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 BCL2P10415 239 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 NANOS2P60321 138 aaKnown RBP8.64□□□□□ -1.03
CHD4-203ENST00000535717 SAPCD1Q5SSQ6 148 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 C11orf45Q8TAV5 145 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 FMC1Q96HJ9 113 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
CHD4-203ENST00000535717 TRBV6-1A0A0K0K1D8 114 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 AKR1C3P42330 323 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 ZNF80P51504 273 aaPredicted RBP8.63□□□□□ -1.03
CHD4-203ENST00000535717 UBE2G1P62253 170 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
CHD4-203ENST00000535717 TMEM183BQ1AE95 376 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 HIST3H2BBQ8N257 126 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
CHD4-203ENST00000535717 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
CHD4-203ENST00000535717 C11orf52Q96A22 123 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 TXNDC17Q9BRA2 123 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 NDUFAF3Q9BU61 184 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 VAX2Q9UIW0 290 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 CBY1Q9Y3M2 126 aa8.63□□□□□ -1.03
CHD4-203ENST00000535717 IGHV1OR15-1A0A075B7D0 117 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 C9JQL5 133 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 GCGP01275 180 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 LTAP01374 205 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 SPART-AS1P0CW21 52 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 MUC21Q5SSG8 566 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 FAM222AQ5U5X8 452 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 ZFAND6Q6FIF0 208 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
CHD4-203ENST00000535717 DKK2Q9UBU2 259 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 TP53TG3Q9ULZ0 132 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 ZFP30Q9Y2G7 519 aa8.62□□□□□ -1.03
CHD4-203ENST00000535717 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
CHD4-203ENST00000535717 TRAV21A0A0B4J279 112 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 RBFOX3A6NFN3 312 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 CBY3A6NI87 242 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 B4DEV8 164 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 PPP1R2P9O14990 202 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 PDE6DO43924 150 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
CHD4-203ENST00000535717 GAGE1Q13065 139 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 C12orf74Q32Q52 190 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
CHD4-203ENST00000535717 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 C11orf72Q8NBR9 251 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 C11orf21Q9P2W6 132 aa8.61□□□□□ -1.03
CHD4-203ENST00000535717 PFN1P07737 140 aaKnown RBP8.6□□□□□ -1.03
CHD4-203ENST00000535717 JOSD1Q15040 202 aaPredicted RBP8.6□□□□□ -1.03
CHD4-203ENST00000535717 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
CHD4-203ENST00000535717 ZC2HC1AQ96GY0 325 aa8.6□□□□□ -1.03
CHD4-203ENST00000535717 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
CHD4-203ENST00000535717 NAGKQ9UJ70 344 aa8.6□□□□□ -1.03
CHD4-203ENST00000535717 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
CHD4-203ENST00000535717 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
CHD4-203ENST00000535717 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 LYRM9A8MSI8 78 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 TCAPO15273 167 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 LINC00614P0C842 121 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 CRIP1P50238 77 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 ZNF506Q5JVG8 444 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 Q6ZTC4 211 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 TMEM183AQ8IXX5 376 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 NHLRC2Q8NBF2 726 aa8.59□□□□□ -1.03
CHD4-203ENST00000535717 FABP5P3A8MUU1 101 aa8.58□□□□□ -1.04
CHD4-203ENST00000535717 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
CHD4-203ENST00000535717 M0R036 132 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 339 ms