RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 LST1O00453 97 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 CACNA1AO00555 2505 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 TTC28Q96AY4 2481 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 TRBV7-7A0A0K0K1E9 115 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 C11orf68Q9H3H3 251 aaKnown RBP3.13□□□□□ -1.91
SOX6-217ENST00000533870 EDA2RQ9HAV5 297 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 CTSZQ9UBR2 303 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 U3KQE9 123 aa3.13□□□□□ -1.91
SOX6-217ENST00000533870 J3QLI3 93 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 RNASE4P34096 147 aaKnown RBP3.12□□□□□ -1.91
SOX6-217ENST00000533870 ANXA2RQ3ZCQ2 193 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 DYNAPQ8N1N2 210 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 PHLDA1Q8WV24 401 aaPredicted RBP3.12□□□□□ -1.91
SOX6-217ENST00000533870 ACACBO00763 2458 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 DYNLRB2Q8TF09 96 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 ICOSQ9Y6W8 199 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 TRAV26-2A0A0B4J265 109 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 TRAV4A0A0B4J268 109 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 MIAQ16674 131 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 C5orf47Q569G3 176 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 LINC00322Q6ZN03 302 aaPredicted RBP3.12□□□□□ -1.91
SOX6-217ENST00000533870 GPHB5Q86YW7 130 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 PATJQ8NI35 1801 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 TRAV25A0A0B4J276 109 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 B4DSR2 109 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 H7C423 109 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 CCL21O00585 134 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 MRPS12O15235 138 aaKnown RBP3.12□□□□□ -1.91
SOX6-217ENST00000533870 NDUFC1O43677 76 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 WFDC3Q8IUB2 231 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 ZFAND3Q9H8U3 227 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 CKAP5Q14008 2032 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 Q8N6K4 173 aa3.12□□□□□ -1.91
SOX6-217ENST00000533870 A0A0J9YXV3 536 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 K7ERJ3 54 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 UBE2L6O14933 153 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 IGF1P05019 195 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 ZNRF2Q8NHG8 242 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 IGHV7-81A0A0B4J1V7 117 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 LINC00205P59089 165 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 Q6JHZ5 121 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 NCOR1O75376 2440 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 EP300Q09472 2414 aaPredicted RBP3.11□□□□□ -1.91
SOX6-217ENST00000533870 APC2O95996 2303 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 XGP55808 180 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 CFHR4Q92496 578 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 PLXNB2O15031 1838 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 ZNF22P17026 224 aaPredicted RBP3.11□□□□□ -1.91
SOX6-217ENST00000533870 RBMY1FQ15415 496 aaKnown RBP3.11□□□□□ -1.91
SOX6-217ENST00000533870 RNF185Q96GF1 192 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 TRIOBPQ9H2D6 2365 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 SHROOM3Q8TF72 1996 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 SPAARA0A1B0GVQ0 90 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 TNFRSF13BO14836 293 aaPredicted RBP3.11□□□□□ -1.91
SOX6-217ENST00000533870 ATP6V0E1O15342 81 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 NDUFA7O95182 113 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 HIST2H2BCQ6DN03 193 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 HIST2H2BDQ6DRA6 164 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 CASP8AP2Q9UKL3 1982 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 PCM1Q15154 2024 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 PIP4P1Q86T03 277 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 TMEM61Q8N0U2 210 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 MRAPQ8TCY5 172 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 PRO0461Q9UI25 63 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 PLXNA2O75051 1894 aa3.11□□□□□ -1.91
SOX6-217ENST00000533870 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 LY6LH3BQJ8 138 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 OVOL3O00110 214 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 COX7CP15954 63 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 PPIFP30405 207 aaKnown RBP3.1□□□□□ -1.91
SOX6-217ENST00000533870 TCF15Q12870 199 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 C8orf49Q96NF6 230 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 MCRIP2Q9BUT9 160 aaKnown RBP3.1□□□□□ -1.91
SOX6-217ENST00000533870 TINCRA0A1B0GVN0 87 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 IGHV4-39P01824 125 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 MUSTN1Q8IVN3 82 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 MSRB1Q9NZV6 116 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 LOXL1Q08397 574 aaPredicted RBP3.1□□□□□ -1.91
SOX6-217ENST00000533870 C3orf22Q8N5N4 141 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 DUX5Q96PT3 197 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 TPSG1Q9NRR2 321 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 TDRD6O60522 2096 aaKnown RBP3.1□□□□□ -1.91
SOX6-217ENST00000533870 MDC1Q14676 2089 aaKnown RBP3.1□□□□□ -1.91
SOX6-217ENST00000533870 KNCNA6PVL3 124 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 E7EQL1 145 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 TCL1BO95988 128 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 IGHV3-30P01768 117 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 IGHG2P01859 326 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 MT-ATP8P03928 68 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 IGHV3-30-5P0DP03 117 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 ZNF80P51504 273 aaPredicted RBP3.1□□□□□ -1.91
SOX6-217ENST00000533870 TANC1Q9C0D5 1861 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 IGHV3-30-3P0DP02 117 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 ZFAND2AQ8N6M9 145 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 TTTY13Q9BZ97 58 aa3.1□□□□□ -1.91
SOX6-217ENST00000533870 ORMDL1Q9P0S3 153 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms