RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 Q5PR19 223 aa12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 HOXA3O43365 443 aaPredicted RBP12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 NMUP48645 174 aa12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 C16orf54Q6UWD8 224 aa12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 C14orf178Q8N769 122 aaPredicted RBP12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 MAP1LC3AQ9H492 121 aa12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 PHLDA3Q9Y5J5 127 aa12.13□□□□□ -0.47
ATP2C1-224ENST00000533801 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 Q96MF0 132 aa12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 CTRLP40313 264 aa12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 TRBV6-1A0A0K0K1D8 114 aa12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
ATP2C1-224ENST00000533801 TRAV12-3A0A0B4J271 114 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 NDUFA4O00483 81 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 A0A087X0K7 114 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 FBLL1A6NHQ2 334 aaKnown RBP12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 F5H697 171 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 GOLT1BQ9Y3E0 138 aa12.11□□□□□ -0.47
ATP2C1-224ENST00000533801 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 M0QZK8 103 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 NUDT3O95989 172 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 NEGR1Q7Z3B1 354 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 A0A1B0GW15 77 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 USMG5Q96IX5 58 aa12.1□□□□□ -0.47
ATP2C1-224ENST00000533801 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 SPOCK3Q9BQ16 436 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 CBY3A6NI87 242 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 TCF21O43680 179 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 C7orf71A4D174 169 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 TMEM8BA6NDV4 472 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 HBDP02042 147 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
ATP2C1-224ENST00000533801 IGHV7-4-1A0A0J9YVY3 117 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 COL5A1-AS1Q5SY13 56 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 GPHB5Q86YW7 130 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 FOSL1P15407 271 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 DKK2Q9UBU2 259 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 SLC25A16P16260 332 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
ATP2C1-224ENST00000533801 TMEM158Q8WZ71 300 aa12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 A0A087WWL8 130 aa12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 LBHQ53QV2 105 aaPredicted RBP12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 KLK9Q9UKQ9 250 aa12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 CD7P09564 240 aa12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 FOXC2Q99958 501 aa12.07□□□□□ -0.48
ATP2C1-224ENST00000533801 NIPBLQ6KC79 2804 aaeCLIP12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 JPT2Q9H910 190 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 LINC01559Q495D7 138 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 NPSP0C0P6 89 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 ASIPP42127 132 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 PET117Q6UWS5 81 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 SMPXQ9UHP9 88 aa12.06□□□□□ -0.48
ATP2C1-224ENST00000533801 A0A096LNJ9 63 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 SPINK13Q1W4C9 94 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 ZNF493Q6ZR52 646 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 LINC00477Q96M19 166 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 UBR5O95071 2799 aaPredicted RBP12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 RPL39LQ96EH5 51 aaKnown RBP12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 TMEM160Q9NX00 188 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 TRAV21A0A0B4J279 112 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 ANKRD39Q53RE8 183 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 TMEM208Q9BTX3 173 aa12.05□□□□□ -0.48
ATP2C1-224ENST00000533801 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 A0A087WW49 117 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 SLURP1P55000 103 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 FAM159AQ6UWV7 190 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 OR2K2Q8NGT1 345 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 U3KQE9 123 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 C9orf47Q6ZRZ4 202 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
ATP2C1-224ENST00000533801 PRM2P04554 102 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 RBAKDNA6NC62 111 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 OVOL1O14753 267 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 ID1P41134 155 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 DSCR9P59020 149 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 C19orf54Q5BKX5 351 aa12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
ATP2C1-224ENST00000533801 SMIM17P0DL12 118 aa12.02□□□□□ -0.48
ATP2C1-224ENST00000533801 ZNF124Q15973 351 aa12.02□□□□□ -0.48
ATP2C1-224ENST00000533801 DPF1Q92782 380 aa12.02□□□□□ -0.48
ATP2C1-224ENST00000533801 MS4A6AQ9H2W1 248 aa12.02□□□□□ -0.48
ATP2C1-224ENST00000533801 VAMP3Q15836 100 aa12.02□□□□□ -0.49
ATP2C1-224ENST00000533801 IGHV4-31P0DP07 118 aa12.02□□□□□ -0.49
ATP2C1-224ENST00000533801 WFDC11Q8NEX6 87 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms