RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NDUFB4O95168 129 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 NBEAP1P0C6P0 100 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 ERVFC1-1P60608 527 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 UBE2L3P68036 154 aaKnown RBP8.61□□□□□ -1.03
CAPN1-223ENST00000533079 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 ARL6IP6Q8N6S5 226 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 C16orf92Q96LL3 132 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 RPS10P5Q9NQ39 176 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 MRPS16Q9Y3D3 137 aaKnown RBP8.61□□□□□ -1.03
CAPN1-223ENST00000533079 ZNF98A6NK75 572 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 H3BNG1 76 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 S100A9P06702 114 aaKnown RBP8.6□□□□□ -1.03
CAPN1-223ENST00000533079 GALR1P47211 349 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 CEBPGP53567 150 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 TAS2R60P59551 318 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
CAPN1-223ENST00000533079 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 OR8I2Q8N0Y5 310 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 C15orf54Q8N8G6 183 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 HIST1H2BAQ96A08 127 aa8.6□□□□□ -1.03
CAPN1-223ENST00000533079 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
CAPN1-223ENST00000533079 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 M0R2Z0 102 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 MRPS12O15235 138 aaKnown RBP8.59□□□□□ -1.03
CAPN1-223ENST00000533079 OR10J4P0C629 311 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 PYYP10082 97 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 CNN1P51911 297 aaKnown RBP8.59□□□□□ -1.03
CAPN1-223ENST00000533079 LINC00315P59091 139 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 RPL23P62829 140 aaKnown RBP8.59□□□□□ -1.03
CAPN1-223ENST00000533079 PDE6HQ13956 83 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 ZNF493Q6ZR52 646 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 Q6ZRN7 208 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-223ENST00000533079 GPR82Q96P67 336 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 ZNF586Q9NXT0 402 aa8.59□□□□□ -1.03
CAPN1-223ENST00000533079 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 GGTLC3B5MD39 225 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 ZNF253O75346 499 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 MT-ND4LP03901 98 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 IGLC2P0DOY2 106 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 RPL7P18124 248 aaKnown RBP8.58□□□□□ -1.04
CAPN1-223ENST00000533079 LINC01551Q86U37 167 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 ANAPC16Q96DE5 110 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 C20orf173Q96LM9 149 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 C17orf77Q96MU5 243 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 KLF12Q9Y4X4 402 aa8.58□□□□□ -1.04
CAPN1-223ENST00000533079 TRBV19A0A075B6N1 114 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 TRAV26-1A0A087WT03 109 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 COLCA2A8K830 154 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 Q6ZSN1 163 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 C5orf17Q8NAS9 161 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 RNASE8Q8TDE3 154 aaKnown RBP8.57□□□□□ -1.04
CAPN1-223ENST00000533079 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
CAPN1-223ENST00000533079 SMIM12Q96EX1 92 aa8.57□□□□□ -1.04
CAPN1-223ENST00000533079 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
CAPN1-223ENST00000533079 TRBV6-1A0A0K0K1D8 114 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 J3QL48 77 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 PPP1R2P9O14990 202 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 PRM2P04554 102 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 AZU1P20160 251 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 RPL35P42766 123 aaKnown RBP8.56□□□□□ -1.04
CAPN1-223ENST00000533079 RANP62826 216 aaKnown RBP8.56□□□□□ -1.04
CAPN1-223ENST00000533079 ESRGQ1W209 222 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 CBLN2Q8IUK8 224 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 IMMP2LQ96T52 175 aa8.56□□□□□ -1.04
CAPN1-223ENST00000533079 TRBV20OR9-2A0A075B6H5 130 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 PGPA6NDG6 321 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 OR5I1Q13606 314 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 ADIRFQ15847 76 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 TMEM183BQ1AE95 376 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 NFE4Q86UQ8 179 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 OCC1Q8TAD7 63 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 ISOC2Q96AB3 205 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 LINC01587Q99440 93 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 DERL1Q9BUN8 251 aa8.55□□□□□ -1.04
CAPN1-223ENST00000533079 TRAV12-2A0A075B6T6 113 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 A0A087X0K7 114 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 FBLL1A6NHQ2 334 aaKnown RBP8.54□□□□□ -1.04
CAPN1-223ENST00000533079 PEX7O00628 323 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 GNG4P50150 75 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 C20orf144Q9BQM9 153 aa8.54□□□□□ -1.04
CAPN1-223ENST00000533079 NOP10Q9NPE3 64 aaKnown RBP8.54□□□□□ -1.04
CAPN1-223ENST00000533079 H7BYZ3 331 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 SIVA1O15304 175 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 GCGP01275 180 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 TCRAP04437 139 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 SLC25A5P05141 298 aaKnown RBP8.53□□□□□ -1.04
CAPN1-223ENST00000533079 AKR1C3P42330 323 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 PYGO2Q9BRQ0 406 aa8.53□□□□□ -1.04
CAPN1-223ENST00000533079 TRBV24-1A0A075B6N3 115 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 A0A0J9YY99 117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms