RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 FAM231AP0DMU4 169 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 FAM231CP0DMU5 169 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 CT45A10P0DMU9 189 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 AZU1P20160 251 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 S100A1P23297 94 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 ZNF674Q2M3X9 581 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 Q86TA4 180 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
PKP3-209ENST00000533069 TMEM263Q8WUH6 116 aaKnown RBP11.82□□□□□ -0.52
PKP3-209ENST00000533069 IGKV2-40A0A087WW87 121 aaPredicted RBP11.81□□□□□ -0.52
PKP3-209ENST00000533069 IGKV2D-40P01614 121 aaPredicted RBP11.81□□□□□ -0.52
PKP3-209ENST00000533069 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
PKP3-209ENST00000533069 HTN1P15515 57 aa11.81□□□□□ -0.52
PKP3-209ENST00000533069 HTN3P15516 51 aa11.81□□□□□ -0.52
PKP3-209ENST00000533069 COX8CQ7Z4L0 72 aa11.81□□□□□ -0.52
PKP3-209ENST00000533069 RNASE8Q8TDE3 154 aaKnown RBP11.81□□□□□ -0.52
PKP3-209ENST00000533069 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
PKP3-209ENST00000533069 KMT2AQ03164 3969 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 KIR3DS1Q14943 382 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 TMEM183AQ8IXX5 376 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 AGPAT4-IT1Q9H0P7 198 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
PKP3-209ENST00000533069 BIRC6Q9NR09 4857 aa11.8□□□□□ -0.52
PKP3-209ENST00000533069 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 B4DEV8 164 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 DEFB130BP0DP73 79 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 DEFB130AP0DP74 79 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 PRNTQ86SH4 94 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 SVBPQ8N300 66 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 VGLL1Q99990 258 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 PYGO2Q9BRQ0 406 aa11.79□□□□□ -0.52
PKP3-209ENST00000533069 TRAV12-3A0A0B4J271 114 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 TRAV34A0A0B4J273 112 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 CRISP2P16562 243 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 ERCC8Q13216 396 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 FAM19A4Q96LR4 140 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 MLST8Q9BVC4 326 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 SDF2L1Q9HCN8 221 aa11.78□□□□□ -0.52
PKP3-209ENST00000533069 TRBV20OR9-2A0A075B6H5 130 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 C7orf71A4D174 169 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 CBY3A6NI87 242 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 KLLNB2CW77 178 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 J3KRW8 73 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 ADCYAP1P18509 176 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 TMEM88Q6PEY1 159 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 LINC01551Q86U37 167 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 POM121L12Q8N7R1 296 aa11.77□□□□□ -0.53
PKP3-209ENST00000533069 ATP6V1G1O75348 118 aa11.76□□□□□ -0.53
PKP3-209ENST00000533069 SNAPINO95295 136 aa11.76□□□□□ -0.53
PKP3-209ENST00000533069 ATP5G1P05496 136 aa11.76□□□□□ -0.53
PKP3-209ENST00000533069 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
PKP3-209ENST00000533069 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
PKP3-209ENST00000533069 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
PKP3-209ENST00000533069 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
PKP3-209ENST00000533069 DNAH6Q9C0G6 4158 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 PPP1R2P9O14990 202 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 GCGP01275 180 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 APOC3P02656 99 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 GPX1P07203 203 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
PKP3-209ENST00000533069 RHEBQ15382 184 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 ADIRFQ15847 76 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 FAM231DQ6ZW35 169 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
PKP3-209ENST00000533069 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
PKP3-209ENST00000533069 F5H768 121 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
PKP3-209ENST00000533069 IGLV2-8P01709 118 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 MGST1P10620 155 aaKnown RBP11.73□□□□□ -0.53
PKP3-209ENST00000533069 RNASE4P34096 147 aaKnown RBP11.73□□□□□ -0.53
PKP3-209ENST00000533069 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 RNF212Q495C1 297 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 FAM162BQ5T6X4 162 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 UBE2DNLQ8IWF7 75 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 ZFAND2AQ8N6M9 145 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 LINC00612Q8N6U2 182 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 C15orf54Q8N8G6 183 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 Q8TAT8 98 aa11.73□□□□□ -0.53
PKP3-209ENST00000533069 TRAV21A0A0B4J279 112 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 FABP5P3A8MUU1 101 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 M0R036 132 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 MT-ND4LP03901 98 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 PFN1P07737 140 aaKnown RBP11.72□□□□□ -0.53
PKP3-209ENST00000533069 DAZ2Q13117 558 aaKnown RBP11.72□□□□□ -0.53
PKP3-209ENST00000533069 ANXA2RQ3ZCQ2 193 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 ANAPC16Q96DE5 110 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
PKP3-209ENST00000533069 Q6AWC8 147 aa11.71□□□□□ -0.53
PKP3-209ENST00000533069 CLRN3Q8NCR9 226 aa11.71□□□□□ -0.53
PKP3-209ENST00000533069 CTDSP1Q9GZU7 261 aa11.71□□□□□ -0.53
PKP3-209ENST00000533069 A0A087WWC5 75 aa11.7□□□□□ -0.54
PKP3-209ENST00000533069 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms