RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 C9JCJ5 164 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 Q8NAQ8 132 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 DEFB4AO15263 64 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 SMUG1Q53HV7 270 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 PRR9Q5T870 116 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 Q6AWC8 147 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 C2CD4CQ8TF44 421 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 C8orf49Q96NF6 230 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 IMMP2LQ96T52 175 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 EDA2RQ9HAV5 297 aa8.11□□□□□ -1.11
TRAPPC4-211ENST00000533012 TRBV24-1A0A075B6N3 115 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 TRAV9-1A0A075B6T8 112 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 GCGP01275 180 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 PRM2P04554 102 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 RPL35P42766 123 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 EMP1P54849 157 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 ZNF493Q6ZR52 646 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 Q86TA4 180 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 BAGE2Q86Y30 109 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 ISOC2Q96AB3 205 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 WWC2-AS2Q96NR7 200 aa8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-211ENST00000533012 TGP01266 2768 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 IGHV1OR15-1A0A075B7D0 117 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 LTAP01374 205 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 AZU1P20160 251 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 RPS10P46783 165 aaKnown RBP8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 ELOBQ15370 118 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 FAM159AQ6UWV7 190 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 TMEM183AQ8IXX5 376 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 SMIM12Q96EX1 92 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 C16orf74Q96GX8 76 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 LINC00467Q9BRT7 94 aa8.09□□□□□ -1.11
TRAPPC4-211ENST00000533012 CBY3A6NI87 242 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 PFN1P07737 140 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 GNG4P50150 75 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 ZNF80P51504 273 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 MUC21Q5SSG8 566 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 Q6ZQT7 251 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 COX8CQ7Z4L0 72 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 LINC01551Q86U37 167 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 TMEM263Q8WUH6 116 aaKnown RBP8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 FAM210BQ96KR6 192 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 NAGKQ9UJ70 344 aa8.08□□□□□ -1.12
TRAPPC4-211ENST00000533012 SPART-AS1P0CW21 52 aa8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 C11orf45Q8TAV5 145 aa8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 RNASE8Q8TDE3 154 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 SFRP2Q96HF1 295 aa8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 YPEL4Q96NS1 127 aa8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 DERL1Q9BUN8 251 aa8.07□□□□□ -1.12
TRAPPC4-211ENST00000533012 TEX48A0A1B0GUV7 120 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 SNURFLB1AK76 121 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 CRIP1P50238 77 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 TDRG1Q3Y452 100 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 COX19Q49B96 90 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 FAM162BQ5T6X4 162 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 NHLRC2Q8NBF2 726 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 OR10G8Q8NGN5 311 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 ZC2HC1AQ96GY0 325 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 TIMM8BQ9Y5J9 83 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 URGCP-MRPS24S4R325 110 aa8.06□□□□□ -1.12
TRAPPC4-211ENST00000533012 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 GNRH2O43555 120 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 ORM1P02763 201 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 S100A8P05109 93 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 CENPWQ5EE01 88 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 IBA57Q5T440 356 aaKnown RBP8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 FAM222AQ5U5X8 452 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 GSN-AS1Q9NRJ2 163 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 DKK2Q9UBU2 259 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 TP53TG3Q9ULZ0 132 aa8.05□□□□□ -1.12
TRAPPC4-211ENST00000533012 TENM3Q9P273 2699 aa8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 PLAC8L1A1L4L8 177 aa8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 LYRM9A8MSI8 78 aa8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 SH2D1AO60880 128 aa8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 MGST1P10620 155 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 NANOS2P60321 138 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 DAZ2Q13117 558 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 C11orf21Q9P2W6 132 aa8.04□□□□□ -1.12
TRAPPC4-211ENST00000533012 TYMSP04818 313 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 TCL1AP56279 114 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 ZNF415Q09FC8 603 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 PRR27Q6MZM9 219 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 C11orf72Q8NBR9 251 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 MUC7Q8TAX7 377 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 DAZAP1Q96EP5 407 aaKnown RBP8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 OSTCQ9NRP0 149 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 MDFICQ9P1T7 246 aa8.03□□□□□ -1.12
TRAPPC4-211ENST00000533012 CELA1Q9UNI1 258 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms