RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MANBALQ9NQG1 85 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 LINC00588Q9Y4M8 146 aa13.2□□□□□ -0.3
SSH3-209ENST00000532600 SCO2A0A1W2PP80 73 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 GAGE7O76087 117 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 FAM3BP58499 235 aaPredicted RBP13.19□□□□□ -0.3
SSH3-209ENST00000532600 BLOC1S1P78537 153 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 HIST1H2BAQ96A08 127 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 PYGO2Q9BRQ0 406 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 LENEPQ9Y5L5 61 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 PCLOQ9Y6V0 5065 aa13.19□□□□□ -0.3
SSH3-209ENST00000532600 F6UZH7 168 aa13.18□□□□□ -0.3
SSH3-209ENST00000532600 GPX1P07203 203 aa13.18□□□□□ -0.3
SSH3-209ENST00000532600 FLI1Q01543 452 aaPredicted RBP13.18□□□□□ -0.3
SSH3-209ENST00000532600 Q6ZTI0 123 aa13.18□□□□□ -0.3
SSH3-209ENST00000532600 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
SSH3-209ENST00000532600 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
SSH3-209ENST00000532600 TEX46H3BTG2 121 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 BCL2P10415 239 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 DAZ2Q13117 558 aaKnown RBP13.17□□□□□ -0.3
SSH3-209ENST00000532600 Q86TA4 180 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 TCEAL7Q9BRU2 100 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 TREM1Q9NP99 234 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
SSH3-209ENST00000532600 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
SSH3-209ENST00000532600 K7EQM0 130 aa13.16□□□□□ -0.3
SSH3-209ENST00000532600 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
SSH3-209ENST00000532600 OR5I1Q13606 314 aa13.16□□□□□ -0.3
SSH3-209ENST00000532600 GSN-AS1Q9NRJ2 163 aa13.16□□□□□ -0.3
SSH3-209ENST00000532600 A0A0J9YY99 117 aa13.15□□□□□ -0.3
SSH3-209ENST00000532600 SNURFLB1AK76 121 aa13.15□□□□□ -0.3
SSH3-209ENST00000532600 C1orf134Q5TEV5 83 aa13.15□□□□□ -0.3
SSH3-209ENST00000532600 Q6AWC8 147 aa13.15□□□□□ -0.3
SSH3-209ENST00000532600 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
SSH3-209ENST00000532600 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
SSH3-209ENST00000532600 ANXA2RQ3ZCQ2 193 aa13.14□□□□□ -0.31
SSH3-209ENST00000532600 C11orf52Q96A22 123 aa13.14□□□□□ -0.31
SSH3-209ENST00000532600 RYR1P21817 5038 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
SSH3-209ENST00000532600 IFNA1P01562 189 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 AKR1C3P42330 323 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
SSH3-209ENST00000532600 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 EIF4E3Q8N5X7 224 aaKnown RBP13.13□□□□□ -0.31
SSH3-209ENST00000532600 FMC1Q96HJ9 113 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
SSH3-209ENST00000532600 LTAP01374 205 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 CCL18P55774 89 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 IFITM2Q01629 132 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 NDFIP1Q9BT67 221 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 KRTAP1-5Q9BYS1 174 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
SSH3-209ENST00000532600 SPINK4O60575 86 aa13.11□□□□□ -0.31
SSH3-209ENST00000532600 GCGP01275 180 aa13.11□□□□□ -0.31
SSH3-209ENST00000532600 CRIP1P50238 77 aa13.11□□□□□ -0.31
SSH3-209ENST00000532600 TNP2Q05952 138 aa13.11□□□□□ -0.31
SSH3-209ENST00000532600 ESRGQ1W209 222 aa13.11□□□□□ -0.31
SSH3-209ENST00000532600 MUC21Q5SSG8 566 aa13.11□□□□□ -0.31
SSH3-209ENST00000532600 IGHV1OR15-1A0A075B7D0 117 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 RBFOX3A6NFN3 312 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 H3BNG1 76 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 RPL35P42766 123 aaKnown RBP13.1□□□□□ -0.31
SSH3-209ENST00000532600 TCL1AP56279 114 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 UBE2G1P62253 170 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 ZNF506Q5JVG8 444 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 SAPCD1Q5SSQ6 148 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 ZC2HC1AQ96GY0 325 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 TXNDC17Q9BRA2 123 aa13.1□□□□□ -0.31
SSH3-209ENST00000532600 TRGV1A0A0A0MS02 117 aa13.09□□□□□ -0.31
SSH3-209ENST00000532600 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
SSH3-209ENST00000532600 SMUG1Q53HV7 270 aa13.09□□□□□ -0.31
SSH3-209ENST00000532600 NHLRC2Q8NBF2 726 aa13.09□□□□□ -0.31
SSH3-209ENST00000532600 MUC4Q99102 2169 aa13.08□□□□□ -0.31
SSH3-209ENST00000532600 RGS13O14921 159 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 PDE6DO43924 150 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.32
SSH3-209ENST00000532600 TOR2AQ5JU69 321 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 IBA57Q5T440 356 aaKnown RBP13.08□□□□□ -0.32
SSH3-209ENST00000532600 C6orf223Q8N319 242 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 MLST8Q9BVC4 326 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 Q9H8V8 135 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 NAGKQ9UJ70 344 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 ZFP30Q9Y2G7 519 aa13.08□□□□□ -0.32
SSH3-209ENST00000532600 TRGV2A0A075B6R0 118 aa13.07□□□□□ -0.32
SSH3-209ENST00000532600 A0A096LPF7 62 aa13.07□□□□□ -0.32
SSH3-209ENST00000532600 RAB19A4D1S5 217 aa13.07□□□□□ -0.32
SSH3-209ENST00000532600 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
SSH3-209ENST00000532600 MED14OSP0DP75 135 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms