RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ITPR3Q14573 2671 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 HLA-DMBP28068 263 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 DLX6P56179 175 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 EXOC3-AS1Q8N2X6 119 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 RNF138Q8WVD3 245 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 MBD6Q96DN6 1003 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 PRADC1Q9BSG0 188 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 IGHV3-72A0A0B4J1Y9 119 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 CENPVL3A0A0U1RRI6 287 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 PSPNO60542 156 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 THBDP07204 575 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 LINC00312Q9Y6C7 94 aa5.4□□□□□ -1.55
TGFBR3-209ENST00000532540 COL8A2P25067 703 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 DUX4L9Q6RFH8 374 aaPredicted RBP5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 Q6ZSR3 168 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 TNRC6BQ9UPQ9 1833 aaKnown RBP5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 DSCAMO60469 2012 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 C17orf100A8MU93 164 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 LGALS1P09382 135 aaKnown RBP5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 SLC25A16P16260 332 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 SPRNQ5BIV9 151 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 TMEM190Q8WZ59 177 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 F8VRH5 84 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 MYOD1P15172 320 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 KHDC1LQ5JSQ8 128 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 FAM120AOSQ5T036 256 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 CFAP126Q5VTH2 177 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 Q8TCH9 128 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 IGFBPL1Q8WX77 278 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
TGFBR3-209ENST00000532540 RNF223E7ERA6 249 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 F5H768 121 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 IGHV1-46P01743 117 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 SAA1P0DJI8 122 aaPredicted RBP5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 TRAV4A0A0B4J268 109 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 CRIP3Q6Q6R5 217 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 Q6ZPA2 131 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 C2CD3Q4AC94 2353 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 LRBAP50851 2863 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 PCSK5Q92824 1860 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 TRAV12-3A0A0B4J271 114 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 RNASE2P10153 161 aaKnown RBP5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 ZNF672Q499Z4 452 aaPredicted RBP5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 CHCHD5Q9BSY4 110 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 BPESC1Q9GZL8 116 aa5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 FLNAP21333 2647 aaKnown RBP5.38□□□□□ -1.55
TGFBR3-209ENST00000532540 COL5A1P20908 1838 aaPredicted RBP5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 PRSS46E5RG02 174 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 SAA2P0DJI9 122 aaPredicted RBP5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 MSMPQ1L6U9 139 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 FXYD5Q96DB9 178 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 URB1-AS1Q96HZ7 61 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 CDIP1Q9H305 208 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 CSDC2Q9Y534 153 aaKnown RBP5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 A0A087WX48 190 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 A4D1N5 150 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 IGKV3-15P01624 115 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 KRTAP10-9P60411 292 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 IL17RELQ6ZVW7 336 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 Q8N8P6 123 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 METRNQ9UJH8 293 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 UNC79Q9P2D8 2635 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 M0R2P5 195 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 UQCRQO14949 82 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 SH2D1AO60880 128 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 CD7P09564 240 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 PLA2G2AP14555 144 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 CCL3L1P16619 93 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 HERVK_113P63121 156 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 LOXL1Q08397 574 aaPredicted RBP5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 ZNF415Q09FC8 603 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 FAM53AQ6NSI3 398 aaPredicted RBP5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 DDB2Q92466 427 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 TMEM14BQ9NUH8 114 aa5.37□□□□□ -1.55
TGFBR3-209ENST00000532540 NUP210LQ5VU65 1888 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 IGKV2D-26A0A0A0MRZ7 120 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 TRAV8-3A0A0A6YYJ7 113 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 VWC2LB2RUY7 222 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 PPP1R17O96001 155 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 IGHG4P01861 327 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 PRB4P10163 310 aaPredicted RBP5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 ZFP2Q6ZN57 461 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 LRRC75A-AS1Q8N1F1 130 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 TRGV9Q99603 122 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 NCKAP5O14513 1909 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 TRAV25A0A0B4J276 109 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 TCL1BO95988 128 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 DNAL4O96015 105 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 C3orf36Q3SXR2 165 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 Q6Q795 121 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 NUP37Q8NFH4 326 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 MRPL20Q9BYC9 149 aaKnown RBP5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 CFC1BP0CG36 223 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 CFC1P0CG37 223 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 LINC00694P0DN24 101 aa5.36□□□□□ -1.55
TGFBR3-209ENST00000532540 LY6EQ16553 131 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms