RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GNRH2O43555 120 aa17.96■□□□□ 0.47
LDLRAD3-203ENST00000528989 GATCO43716 136 aaKnown RBP17.96■□□□□ 0.47
LDLRAD3-203ENST00000528989 DEFB135Q30KP9 77 aa17.96■□□□□ 0.47
LDLRAD3-203ENST00000528989 C15orf54Q8N8G6 183 aa17.96■□□□□ 0.47
LDLRAD3-203ENST00000528989 B4DEV8 164 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 TMEM208Q9BTX3 173 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 RPP21Q9H633 154 aaKnown RBP17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 GRIFINA4D1Z8 144 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 TMEM189A5PLL7 270 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 MT-ND4LP03901 98 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 LINC01559Q495D7 138 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 FAM159AQ6UWV7 190 aa17.95■□□□□ 0.46
LDLRAD3-203ENST00000528989 RHEBQ15382 184 aa17.94■□□□□ 0.46
LDLRAD3-203ENST00000528989 IGHV1OR15-1A0A075B7D0 117 aa17.92■□□□□ 0.46
LDLRAD3-203ENST00000528989 H7BYZ3 331 aa17.92■□□□□ 0.46
LDLRAD3-203ENST00000528989 ANAPC16Q96DE5 110 aa17.92■□□□□ 0.46
LDLRAD3-203ENST00000528989 C20orf144Q9BQM9 153 aa17.92■□□□□ 0.46
LDLRAD3-203ENST00000528989 AZU1P20160 251 aa17.91■□□□□ 0.46
LDLRAD3-203ENST00000528989 ZNF705AQ6ZN79 300 aaPredicted RBP17.91■□□□□ 0.46
LDLRAD3-203ENST00000528989 MRAPQ8TCY5 172 aa17.91■□□□□ 0.46
LDLRAD3-203ENST00000528989 SCO1O75880 301 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 TYMSP04818 313 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 TDRG1Q3Y452 100 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 SBSPONQ8IVN8 264 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 PYGO2Q9BRQ0 406 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 GOLT1BQ9Y3E0 138 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 SPRY2O43597 315 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 TCL1AP56279 114 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 GTSF1Q8WW33 167 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 MDFICQ9P1T7 246 aa17.9■□□□□ 0.46
LDLRAD3-203ENST00000528989 CBY3A6NI87 242 aa17.89■□□□□ 0.45
LDLRAD3-203ENST00000528989 TMEM256Q8N2U0 113 aa17.89■□□□□ 0.45
LDLRAD3-203ENST00000528989 MEGF8Q7Z7M0 2845 aa17.89■□□□□ 0.45
LDLRAD3-203ENST00000528989 A0A087WWC5 75 aa17.88■□□□□ 0.45
LDLRAD3-203ENST00000528989 UBE2CO00762 179 aa17.88■□□□□ 0.45
LDLRAD3-203ENST00000528989 PPP1R2P9O14990 202 aa17.88■□□□□ 0.45
LDLRAD3-203ENST00000528989 Q6ZWC4 215 aa17.88■□□□□ 0.45
LDLRAD3-203ENST00000528989 RETNQ9HD89 108 aa17.88■□□□□ 0.45
LDLRAD3-203ENST00000528989 TSKUQ8WUA8 353 aa17.87■□□□□ 0.45
LDLRAD3-203ENST00000528989 KCNS1Q96KK3 526 aa17.87■□□□□ 0.45
LDLRAD3-203ENST00000528989 RCHY1Q96PM5 261 aa17.87■□□□□ 0.45
LDLRAD3-203ENST00000528989 NEU1Q99519 415 aa17.87■□□□□ 0.45
LDLRAD3-203ENST00000528989 CTDSP1Q9GZU7 261 aa17.87■□□□□ 0.45
LDLRAD3-203ENST00000528989 TIMM8BQ9Y5J9 83 aaPredicted RBP17.87■□□□□ 0.45
LDLRAD3-203ENST00000528989 A8MWL6 223 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 FAM3BP58499 235 aaPredicted RBP17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 DEFA6Q01524 100 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 CT83Q5H943 113 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 TMEM88Q6PEY1 159 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 TPPP3Q9BW30 176 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 MUC21A0A0G2JKD1 596 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 MUC21A0A140T8X8 626 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 RNF183Q96D59 192 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 TMEM242Q9NWH2 141 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 URGCP-MRPS24S4R325 110 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 X6R8D5 127 aa17.86■□□□□ 0.45
LDLRAD3-203ENST00000528989 SSTP61278 116 aa17.85■□□□□ 0.45
LDLRAD3-203ENST00000528989 IL36BQ9NZH7 164 aa17.85■□□□□ 0.45
LDLRAD3-203ENST00000528989 IGHV3-16A0A0C4DH30 117 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 HIGD1CA8MV81 97 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 RNASE3P12724 160 aaKnown RBP17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 CBLN2Q8IUK8 224 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 OR11H2Q8NH07 326 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 LINC00467Q9BRT7 94 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 SMIM27A0A1W2PRY6 76 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 H3BVH4 76 aa17.84■□□□□ 0.45
LDLRAD3-203ENST00000528989 XKRY2A2RUG3 117 aa17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 S100A4P26447 101 aaKnown RBP17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 ASIPP42127 132 aa17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 RPS20P60866 119 aaKnown RBP17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 PGLYRP4Q96LB8 373 aa17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 OVOL2Q9BRP0 275 aa17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 GSN-AS1Q9NRJ2 163 aa17.83■□□□□ 0.44
LDLRAD3-203ENST00000528989 ARMS2P0C7Q2 107 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 C11orf72Q8NBR9 251 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 SPINK4O60575 86 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 IGLC6P0CF74 106 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 RRN3P1Q2M238 152 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 LYZL1Q6UWQ5 148 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 NUP35Q8NFH5 326 aa17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 RNASE8Q8TDE3 154 aaKnown RBP17.82■□□□□ 0.44
LDLRAD3-203ENST00000528989 FER1L6-AS1Q8NA97 138 aa17.81■□□□□ 0.44
LDLRAD3-203ENST00000528989 GFRA4Q9GZZ7 299 aa17.8■□□□□ 0.44
LDLRAD3-203ENST00000528989 TRGV11A0A075B6L2 103 aa17.8■□□□□ 0.44
LDLRAD3-203ENST00000528989 FOXA3P55318 350 aaPredicted RBP17.8■□□□□ 0.44
LDLRAD3-203ENST00000528989 PLAC8L1A1L4L8 177 aa17.79■□□□□ 0.44
LDLRAD3-203ENST00000528989 DEFB4AO15263 64 aa17.79■□□□□ 0.44
LDLRAD3-203ENST00000528989 SSBP4Q9BWG4 385 aaPredicted RBP17.79■□□□□ 0.44
LDLRAD3-203ENST00000528989 NAT8BQ9UHF3 227 aa17.79■□□□□ 0.44
LDLRAD3-203ENST00000528989 CXCL1P09341 107 aa17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 EMP1P54849 157 aa17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 DNLZQ5SXM8 178 aa17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 TMEM263Q8WUH6 116 aaKnown RBP17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 FAM231BA6NCW3 169 aa17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 OR10AG1Q8NH19 301 aa17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 C9orf85Q96MD7 179 aa17.78■□□□□ 0.44
LDLRAD3-203ENST00000528989 TENM3Q9P273 2699 aa17.77■□□□□ 0.44
LDLRAD3-203ENST00000528989 SCRT2Q9NQ03 307 aa17.77■□□□□ 0.43
LDLRAD3-203ENST00000528989 PRKDCP78527 4128 aaKnown RBP17.76■□□□□ 0.43
LDLRAD3-203ENST00000528989 A0A1W2PPQ1 181 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms