RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SUN5Q8TC36 379 aa4.9□□□□□ -1.63
ITGB1-218ENST00000528877 GNPNAT1Q96EK6 184 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-218ENST00000528877 ST6GAL2Q96JF0 529 aa4.9□□□□□ -1.63
ITGB1-218ENST00000528877 SMIM3Q9BZL3 60 aa4.9□□□□□ -1.63
ITGB1-218ENST00000528877 GSN-AS1Q9NRJ2 163 aa4.9□□□□□ -1.63
ITGB1-218ENST00000528877 LINC00588Q9Y4M8 146 aa4.9□□□□□ -1.63
ITGB1-218ENST00000528877 KLF12Q9Y4X4 402 aa4.9□□□□□ -1.63
ITGB1-218ENST00000528877 NBDYA0A0U1RRE5 68 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 SERTM2A0A1B0GWG4 89 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 RNF222A6NCQ9 220 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 PRSS29PA6NIE9 313 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 GAGE7O76087 117 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 GAGE12FP0CL80 117 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 GAGE12GP0CL81 117 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 GAGE12IP0CL82 117 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 STAG3L2P0CL84 134 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 STAG3L3P0CL85 134 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 BTF3P20290 206 aaKnown RBP4.89□□□□□ -1.63
ITGB1-218ENST00000528877 RNASE4P34096 147 aaKnown RBP4.89□□□□□ -1.63
ITGB1-218ENST00000528877 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-218ENST00000528877 CCL18P55774 89 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 RAB2AP61019 212 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 RANP62826 216 aaKnown RBP4.89□□□□□ -1.63
ITGB1-218ENST00000528877 SERF2P84101 59 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 ZNF415Q09FC8 603 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 FAM74A1Q5RGS3 127 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 ATG101Q9BSB4 218 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 MED28Q9H204 178 aa4.89□□□□□ -1.63
ITGB1-218ENST00000528877 MRPS16Q9Y3D3 137 aaKnown RBP4.89□□□□□ -1.63
ITGB1-218ENST00000528877 RYR1P21817 5038 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 hCG_2014768A0A024R1R8 64 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 IGLV2-18A0A075B6J9 118 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 TRGV2A0A075B6R0 118 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 A0A1W2PPQ1 181 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 A0A1W2PPV4 95 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 M0R2N4 97 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 MBP02144 154 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 ARL14EPLP0DKL9 152 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 TTC32Q5I0X7 151 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 C1orf134Q5TEV5 83 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 OR10G4Q8NGN3 311 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 OR10G9Q8NGN4 311 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 OR10G7Q8NGN6 311 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 VSIG2Q96IQ7 327 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 ARPC5LQ9BPX5 153 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 MUC4Q99102 2169 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 HSPG2P98160 4391 aa4.88□□□□□ -1.63
ITGB1-218ENST00000528877 A0A096LPF7 62 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 TRGV1A0A0A0MS02 117 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 G3V3Q6 166 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 ATP6V0CP27449 155 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 OR5I1Q13606 314 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 Q5BKY6 102 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 Q6ZQT7 251 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 SSX7Q7RTT5 188 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 IQCF2Q8IXL9 164 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 C5orf17Q8NAS9 161 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 HSD17B11Q8NBQ5 300 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 CMTM2Q8TAZ6 248 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 RASL10AQ92737 203 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 SPXQ9BT56 116 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 C1orf43Q9BWL3 253 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 TNFSF18Q9UNG2 199 aa4.87□□□□□ -1.63
ITGB1-218ENST00000528877 A0A0J9YY99 117 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 PGPA6NDG6 321 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 FBLL1A6NHQ2 334 aaKnown RBP4.86□□□□□ -1.63
ITGB1-218ENST00000528877 GGTLC3B5MD39 225 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 CXorf1O96002 111 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 TCRAP04437 139 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 GCHFRP30047 84 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 SLAQ13239 276 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 FAM159AQ6UWV7 190 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 GOLT1AQ6ZVE7 132 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 C6orf223Q8N319 242 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 INO80EQ8NBZ0 244 aaPredicted RBP4.86□□□□□ -1.63
ITGB1-218ENST00000528877 TVP23CQ96ET8 276 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 KRTAP1-5Q9BYS1 174 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 SH3BGRL3Q9H299 93 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 Q9H8V8 135 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 TMEM167BQ9NRX6 74 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 MRPL16Q9NX20 251 aaKnown RBP4.86□□□□□ -1.63
ITGB1-218ENST00000528877 PRO0255Q9UI72 69 aa4.86□□□□□ -1.63
ITGB1-218ENST00000528877 APOBP04114 4563 aaKnown RBP4.85□□□□□ -1.63
ITGB1-218ENST00000528877 TRAV8-1A0A0A6YYK1 113 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 BORCS7-ASMTA0A0B4J1R7 106 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 A0A1W2PRE2 83 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 EIF3GO75821 320 aaKnown RBP eCLIP4.85□□□□□ -1.63
ITGB1-218ENST00000528877 IGLV2-11P01706 119 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 CRYBA4P53673 196 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 TMEM183BQ1AE95 376 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 ESRGQ1W209 222 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 MUC21Q5SSG8 566 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 TMEM183AQ8IXX5 376 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 CYB561D1Q8N8Q1 229 aa4.85□□□□□ -1.63
ITGB1-218ENST00000528877 TMEM75Q8N9X5 138 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms