RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SPXQ9BT56 116 aa3.84□□□□□ -1.79
HMGB1P40-201ENST00000525121 SCO2A0A1W2PP80 73 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 B4DEV8 164 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 M0R2P5 195 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 SPINK4O60575 86 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 LTAP01374 205 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 IGLV2-11P01706 119 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 ORM1P02763 201 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 BCL2P10415 239 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 ASIPP42127 132 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 MEF2BQ02080 365 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 SLAQ13239 276 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 OR5I1Q13606 314 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 LGALS9CQ6DKI2 356 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 TMEM88Q6PEY1 159 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 Q6ZTI0 123 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 BAGE2Q86Y30 109 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 C11orf72Q8NBR9 251 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 TVP23CQ96ET8 276 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 LINC00479Q96M42 142 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 BIN3Q9NQY0 253 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 MRPL16Q9NX20 251 aaKnown RBP3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 PLA2G2EQ9NZK7 142 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 VAX2Q9UIW0 290 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 TP53TG3Q9ULZ0 132 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 KLF12Q9Y4X4 402 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 NBEAL2Q6ZNJ1 2754 aa3.83□□□□□ -1.8
HMGB1P40-201ENST00000525121 DNAH9Q9NYC9 4486 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 TRGV4A0A0C4DH28 118 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 IGHV3-16A0A0C4DH30 117 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 M0R036 132 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 SH2D1AO60880 128 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 NUDT3O95989 172 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 TYMSP04818 313 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 RPL35P42766 123 aaKnown RBP3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 GNG4P50150 75 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 CCL20P78556 96 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 Q6ZQT7 251 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 LINC00612Q8N6U2 182 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 SYT8Q8NBV8 401 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 PCNPQ8WW12 178 aaKnown RBP3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 C11orf52Q96A22 123 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 SMIM12Q96EX1 92 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZC2HC1AQ96GY0 325 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 C18orf15Q96N68 181 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 MED9Q9NWA0 146 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 MDFICQ9P1T7 246 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 APLNQ9ULZ1 77 aa3.82□□□□□ -1.8
HMGB1P40-201ENST00000525121 TRAV26-1A0A087WT03 109 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 A0A0J9YY99 117 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 XKRY2A2RUG3 117 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 C9JCJ5 164 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 H3BNG1 76 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 PAX4O43316 350 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 GNRH2O43555 120 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 CIDEAO60543 219 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 MGST1P10620 155 aaKnown RBP3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZNF80P51504 273 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 CCL18P55774 89 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZNF876PQ49A33 203 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 CENPWQ5EE01 88 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 PRR27Q6MZM9 219 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 COX8CQ7Z4L0 72 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 NHLRC2Q8NBF2 726 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 OR4C5Q8NGB2 326 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 DAZAP1Q96EP5 407 aaKnown RBP3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 EIF5A2Q9GZV4 153 aaKnown RBP3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
HMGB1P40-201ENST00000525121 TMSB15BA0A087X1C1 80 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 TRAV4A0A0B4J268 109 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 RBFOX3A6NFN3 312 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 KRBOX1C9JBD0 128 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 TMEM250H0YL14 139 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 H3BVH4 76 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 CEBPGP53567 150 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 FAM3BP58499 235 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 ZNF674Q2M3X9 581 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 RNF212Q495C1 297 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 LINC01559Q495D7 138 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 RASL10AQ92737 203 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 C9orf85Q96MD7 179 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 DERL1Q9BUN8 251 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 IL36BQ9NZH7 164 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 C11orf21Q9P2W6 132 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 PRO0255Q9UI72 69 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 HHLA3Q9XRX5 114 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 PHLDA3Q9Y5J5 127 aa3.8□□□□□ -1.8
HMGB1P40-201ENST00000525121 IGKV3D-20A0A0C4DH25 116 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 GRIFINA4D1Z8 144 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 A8MWV9 139 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 RHODO00212 210 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 P01737 135 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 CXCL1P09341 107 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 MED14OSP0DP75 135 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 HOXA5P20719 270 aa3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 RPS20P60866 119 aaKnown RBP3.79□□□□□ -1.8
HMGB1P40-201ENST00000525121 RAB14P61106 215 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms