RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 HYPMO75409 117 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 MED6O75586 246 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 ADAP1O75689 374 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 SMR3BP02814 79 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 TCRBP04435 133 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 RPL7P18124 248 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 CXCL3P19876 107 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 S100PP25815 95 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 RPL35P42766 123 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 CDKN1BP46527 198 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 AKR1D1P51857 326 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 SRPXP78539 464 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 Q5VSD8 79 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 ZNF493Q6ZR52 646 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 CYP2G1PQ6ZSU1 146 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 ACOT7LQ6ZUV0 252 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 SVBPQ8N300 66 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 OR2T35Q8NGX2 323 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 RNASE8Q8TDE3 154 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 TMEM263Q8WUH6 116 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 SFT2D1Q8WV19 159 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 FRZBQ92765 325 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 CIB3Q96Q77 187 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 SHANK2-AS3Q9BTD1 123 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 OR51M1Q9H341 326 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 MDFICQ9P1T7 246 aa3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 MRPS16Q9Y3D3 137 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-239ENST00000523685 TRGV2A0A075B6R0 118 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 TRAV6A0A075B6T7 132 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 TRAV12-3A0A0B4J271 114 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 SSNA1O43805 119 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 PITX3O75364 302 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 S100A9P06702 114 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 LINC00869P0C866 280 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 CXCL2P19875 107 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 S100A11P31949 105 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 HAMPP81172 84 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 DNLZQ5SXM8 178 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 C10orf91Q5T1B1 145 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 ATRAIDQ6UW56 229 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 Q6ZTI0 123 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 STX12Q86Y82 276 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 LYPD1Q8N2G4 141 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 TOMM5Q8N4H5 51 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 PCNPQ8WW12 178 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 PHYHIPLQ96FC7 376 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 UPK3BQ9BT76 320 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 ARL6Q9H0F7 186 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 C20orf85Q9H1P6 137 aa3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 CARHSP1Q9Y2V2 147 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 STRAPQ9Y3F4 350 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-239ENST00000523685 FAT1Q14517 4588 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 A0A087X0K7 114 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 A0A096LPF7 62 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 TRGV1A0A0A0MS02 117 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 DUXBA0A1W2PPF3 345 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 A4D1N5 150 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 RAB19A4D1S5 217 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 SIVA1O15304 175 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 EIF3GO75821 320 aaKnown RBP eCLIP3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 NXPH4O95158 308 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 IFNA5P01569 189 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 IGHV3-53P01767 116 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 APOC3P02656 99 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 DNAH10OSP0CZ25 163 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 PVALBP20472 110 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 XGP55808 180 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 AP3S2P59780 193 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 RAB4BP61018 213 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 SLC38A11Q08AI6 406 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 ZNF345Q14585 488 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 TMEM128Q5BJH2 165 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 C12orf45Q8N5I9 185 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 VSIG2Q96IQ7 327 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 ALKBH7Q9BT30 221 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 ARV1Q9H2C2 271 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 PSENENQ9NZ42 101 aa3.57□□□□□ -1.84
CTNNA1-239ENST00000523685 PIGBOS1A0A0B4J2F0 54 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 H3BNG1 76 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 SLC17A3O00476 420 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 GOSR2O14653 212 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 SSSCA1O60232 199 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 COX7A2P2O60397 106 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 NDUFS6O75380 124 aaKnown RBP3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 SFT2D2O95562 160 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 METTL15P1P0C7V9 234 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 CT45A10P0DMU9 189 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 SLC25A6P12236 298 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 FAUP35544 74 aaKnown RBP3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 LEPP41159 167 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 KRTAP10-1P60331 282 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 RAB5BP61020 215 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 SELENOTP62341 195 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 SRSF9Q13242 221 aaKnown RBP eCLIP3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 PPP1R1AQ13522 171 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 LCN15Q6UWW0 184 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 ALKAL2Q6UX46 152 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 PATE2Q6UY27 113 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms