RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 ERCC8Q13216 396 aa16.57■□□□□ 0.24
PTP4A3-204ENST00000521578 ADAMTSL5Q6ZMM2 481 aa16.57■□□□□ 0.24
PTP4A3-204ENST00000521578 TSTD3H0UI37 97 aa16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 AMTP48728 403 aa16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 MCRIP2Q9BUT9 160 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 PPP1R14DQ9NXH3 145 aa16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 ZNF664Q8N3J9 261 aa16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 BORCS7Q96B45 105 aa16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 NRN1Q9NPD7 142 aa16.56■□□□□ 0.24
PTP4A3-204ENST00000521578 CTAG1AP78358 180 aa16.55■□□□□ 0.24
PTP4A3-204ENST00000521578 OXLD1Q5BKU9 147 aa16.55■□□□□ 0.24
PTP4A3-204ENST00000521578 C9orf66Q5T8R8 295 aa16.55■□□□□ 0.24
PTP4A3-204ENST00000521578 AGPAT4-IT1Q9H0P7 198 aa16.55■□□□□ 0.24
PTP4A3-204ENST00000521578 SMPXQ9UHP9 88 aa16.55■□□□□ 0.24
PTP4A3-204ENST00000521578 FABP5P3A8MUU1 101 aa16.54■□□□□ 0.24
PTP4A3-204ENST00000521578 ZNF493Q6ZR52 646 aa16.54■□□□□ 0.24
PTP4A3-204ENST00000521578 C9orf47Q6ZRZ4 202 aa16.54■□□□□ 0.24
PTP4A3-204ENST00000521578 RHPN1-AS1Q9BWJ2 59 aa16.54■□□□□ 0.24
PTP4A3-204ENST00000521578 PMCHP20382 165 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 LYZL1Q6UWQ5 148 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 NIT1Q86X76 327 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 PRO1933Q9H354 126 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 ZNF138P52744 262 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 ZNF575Q86XF7 245 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 DYNLRB2Q8TF09 96 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 C16orf92Q96LL3 132 aa16.53■□□□□ 0.24
PTP4A3-204ENST00000521578 DMRTA1Q5VZB9 504 aa16.52■□□□□ 0.24
PTP4A3-204ENST00000521578 SIGLEC8Q9NYZ4 499 aa16.52■□□□□ 0.24
PTP4A3-204ENST00000521578 TMSB15BA0A087X1C1 80 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 SOCS3O14543 225 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 IGLC6P0CF74 106 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 CTRLP40313 264 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 TMEM78Q5T7P6 136 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 URB1-AS1Q96HZ7 61 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 NOTCH1P46531 2555 aa16.51■□□□□ 0.23
PTP4A3-204ENST00000521578 G3V4G9 280 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 HSBP1O75506 76 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 DDTP30046 118 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 INSL3P51460 131 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 LINC01559Q495D7 138 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 FAM19A2Q8N3H0 131 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 CHCHD1Q96BP2 118 aaKnown RBP16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 TPPP3Q9BW30 176 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 ZNF705DP0CH99 300 aaPredicted RBP16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 ZNF705BP0CI00 300 aaPredicted RBP16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 TEX43Q6ZNM6 134 aa16.5■□□□□ 0.23
PTP4A3-204ENST00000521578 NBEAL1Q6ZS30 2694 aa16.49■□□□□ 0.23
PTP4A3-204ENST00000521578 HIST1H1AQ02539 215 aaPredicted RBP16.49■□□□□ 0.23
PTP4A3-204ENST00000521578 DEFB114Q30KQ6 69 aa16.49■□□□□ 0.23
PTP4A3-204ENST00000521578 FER1L6-AS1Q8NA97 138 aa16.49■□□□□ 0.23
PTP4A3-204ENST00000521578 LENEPQ9Y5L5 61 aa16.49■□□□□ 0.23
PTP4A3-204ENST00000521578 IGLV1-51P01701 117 aa16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 CD300EQ496F6 205 aaPredicted RBP16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 RNASEKQ6P5S7 137 aaKnown RBP16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 Q8N976 141 aa16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 C20orf173Q96LM9 149 aa16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 ORM1P02763 201 aa16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 KRTDAPP60985 99 aa16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 RPL11P62913 178 aaKnown RBP16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 SAMD13Q5VXD3 122 aa16.48■□□□□ 0.23
PTP4A3-204ENST00000521578 NTF3P20783 257 aa16.47■□□□□ 0.23
PTP4A3-204ENST00000521578 SAMD5Q5TGI4 173 aa16.47■□□□□ 0.23
PTP4A3-204ENST00000521578 CNFNQ9BYD5 112 aa16.47■□□□□ 0.23
PTP4A3-204ENST00000521578 LINC00477Q96M19 166 aa16.46■□□□□ 0.23
PTP4A3-204ENST00000521578 SORL1Q92673 2214 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 M0R2Z0 102 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 WIPF1O43516 503 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 C3orf79P0CE67 100 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 FAM104BQ5XKR9 115 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 TMEM61Q8N0U2 210 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 ZNF738Q8NE65 137 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 U3KQK5 164 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 KIR2DL5BA0A0G2JN68 375 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 KIR2DL5BA0A0G2JPC4 375 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 LINC00614P0C842 121 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 DEFA6Q01524 100 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 KIR2DL5AQ8N109 375 aa16.45■□□□□ 0.22
PTP4A3-204ENST00000521578 IGKV3-7A0A075B6H7 116 aa16.44■□□□□ 0.22
PTP4A3-204ENST00000521578 RAB4AP20338 218 aa16.43■□□□□ 0.22
PTP4A3-204ENST00000521578 IGKV3D-20A0A0C4DH25 116 aa16.42■□□□□ 0.22
PTP4A3-204ENST00000521578 C11orf21Q9P2W6 132 aa16.42■□□□□ 0.22
PTP4A3-204ENST00000521578 OR2K2Q8NGT1 345 aa16.42■□□□□ 0.22
PTP4A3-204ENST00000521578 OR10J6PQ8NGY7 276 aa16.42■□□□□ 0.22
PTP4A3-204ENST00000521578 C14orf144Q96I85 54 aa16.42■□□□□ 0.22
PTP4A3-204ENST00000521578 KRTAP10-11P60412 298 aa16.41■□□□□ 0.22
PTP4A3-204ENST00000521578 TWIST1Q15672 202 aa16.41■□□□□ 0.22
PTP4A3-204ENST00000521578 TMEM191AQ9H0A3 160 aa16.41■□□□□ 0.22
PTP4A3-204ENST00000521578 ID1P41134 155 aa16.4■□□□□ 0.22
PTP4A3-204ENST00000521578 C20orf144Q9BQM9 153 aa16.4■□□□□ 0.22
PTP4A3-204ENST00000521578 IGHV1-24A0A0C4DH33 117 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 OR5AL1P0C617 328 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 EGFEM1PQ0D2K5 195 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 TDRG1Q3Y452 100 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 EBLN2Q6P2I7 272 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 AMN1Q8IY45 258 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 FAM19A4Q96LR4 140 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 NDUFAF3Q9BU61 184 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 TRAV25A0A0B4J276 109 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 MUC21A0A0G2JKD1 596 aa16.39■□□□□ 0.21
PTP4A3-204ENST00000521578 TRBV7-9A0A0J9YWB2 115 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms