RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 HHLA3Q9XRX5 114 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CYSLTR1Q9Y271 337 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 UFC1Q9Y3C8 167 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 CSDC2Q9Y534 153 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 U3KQK5 164 aa2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 LAMA2P24043 3122 aaKnown RBP2.11□□□□□ -2.07
HMGB1P41-201ENST00000520234 SDK2Q58EX2 2172 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TRIOBPQ9H2D6 2365 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SPTBN5Q9NRC6 3674 aaKnown RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TRAV25A0A0B4J276 109 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A1W2PPV4 95 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM213A2RRL7 107 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 C19orf71A6NCJ1 209 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 FABP5P3A8MUU1 101 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 C12orf77C9JDV5 145 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 INS-IGF2F8WCM5 200 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 CCDC179H3BU77 68 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 J3QR89 54 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 RTL8CO15255 209 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 LEPROTL1O95214 131 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 RBP4P02753 201 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SMIM13P0DJ93 91 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 USF1P22415 310 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 MPV17P39210 176 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 ATP5J2P56134 94 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TCL1AP56279 114 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 RPL30P62888 115 aaKnown RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 PLGLB1Q02325 96 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 AESQ08117 197 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 CATR1Q13166 79 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 POU2AF1Q16633 256 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 PSMG4Q5JS54 123 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SPANXN5Q5MJ07 72 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM78Q5T7P6 136 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 CFAP126Q5VTH2 177 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 MORN3Q6PF18 240 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SSX8Q7RTT4 187 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 PCP2Q8IVA1 136 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 C6orf223Q8N319 242 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SMIM20Q8N5G0 67 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM105Q8N8V8 129 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 KLF14Q8TD94 323 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM158Q8WZ71 300 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 ARPC1AQ92747 370 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 FAM104AQ969W3 186 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 PTH2Q96A98 100 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 COQ2Q96H96 371 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF488Q96MN9 340 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 PRELID3AQ96N28 172 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 LINC01587Q99440 93 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SPANXA1Q9NS26 97 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 HILPDAQ9Y5L2 63 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 SOX21Q9Y651 276 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 DOCK10Q96BY6 2186 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 MKI67P46013 3256 aaKnown RBP2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 REV3LO60673 3130 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 C5orf42Q9H799 3197 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 ABCA1O95477 2261 aa2.1□□□□□ -2.07
HMGB1P41-201ENST00000520234 COL27A1Q8IZC6 1860 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 XIRP2A4UGR9 3374 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 TRBV7-3A0A075B6L6 115 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 IGKV2D-26A0A0A0MRZ7 120 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A1B0GW15 77 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 A6NDX4 124 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 C17orf98A8MV24 154 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 K7ERJ3 54 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 SNAI2O43623 268 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 FOXH1O75593 365 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 PRB2P02812 416 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC25A5P05141 298 aaKnown RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 CHTF8P0CG12 524 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 PRTN3P24158 256 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 G6PCP35575 357 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 RPL13AP40429 203 aaKnown RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 UBE2D3P61077 147 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 HSPE1P61604 102 aaKnown RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 UBE2D2P62837 147 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC35B1P78383 322 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 FXYD3Q14802 87 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 TAL2Q16559 108 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 RTL8BQ17RB0 113 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 RRN3P1Q2M238 152 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 ALKBH6Q3KRA9 238 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 C5orf47Q569G3 176 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 IBA57Q5T440 356 aaKnown RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 MIC13Q5XKP0 118 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 RNASEKQ6P5S7 137 aaKnown RBP2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 IGFL3Q6UXB1 125 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 H2BFWTQ7Z2G1 175 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 C8orf31Q8N9H6 132 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q8N9W7 124 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 MYOZ3Q8TDC0 251 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 ADTRPQ96IZ2 230 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 DNAJC30Q96LL9 226 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 MAP1LC3CQ9BXW4 147 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 DEFB127Q9H1M4 99 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM14BQ9NUH8 114 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF492Q9P255 531 aa2.09□□□□□ -2.07
HMGB1P41-201ENST00000520234 KLK12Q9UKR0 248 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms