RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 NHP2Q9NX24 153 aaKnown RBP12.63□□□□□ -0.39
PCDHGA11-202ENST00000518882 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
PCDHGA11-202ENST00000518882 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 CEND1Q8N111 149 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 C16orf92Q96LL3 132 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 A0A087WX48 190 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
PCDHGA11-202ENST00000518882 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 DEFB1P60022 68 aa12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 SRSF1Q07955 248 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 GLMPQ8WWB7 406 aa12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 LMO4P61968 165 aa12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 ITLN2Q8WWU7 325 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-202ENST00000518882 NPFFO15130 113 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 BPESC1Q9GZL8 116 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 KLRB1Q12918 225 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 UBTD1Q9HAC8 227 aa12.59□□□□□ -0.39
PCDHGA11-202ENST00000518882 M0R381 172 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 TRBV12-3P01733 135 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 KLK15Q9H2R5 256 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 C19orf54Q5BKX5 351 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 RASL10AQ92737 203 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 MRAP2Q96G30 205 aa12.58□□□□□ -0.4
PCDHGA11-202ENST00000518882 C9orf139Q6ZV77 190 aa12.57□□□□□ -0.4
PCDHGA11-202ENST00000518882 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
PCDHGA11-202ENST00000518882 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
PCDHGA11-202ENST00000518882 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
PCDHGA11-202ENST00000518882 PLNP26678 52 aa12.57□□□□□ -0.4
PCDHGA11-202ENST00000518882 SPTAN1Q13813 2472 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-202ENST00000518882 IGLL5B9A064 214 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 E9PLD3 99 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 F8VRH5 84 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 ARL3P36405 182 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 MUC4Q99102 2169 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 RNF223E7ERA6 249 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 H7C1H1 209 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
PCDHGA11-202ENST00000518882 SOCS3O14543 225 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 C12orf74Q32Q52 190 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 TOMM6Q96B49 74 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 SCGB3A1Q96QR1 104 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 MOB4Q9Y3A3 225 aa12.54□□□□□ -0.4
PCDHGA11-202ENST00000518882 COL12A1Q99715 3063 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 FAM223BA6NKX1 122 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 F6UB75 175 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 TAL2Q16559 108 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 FAM223AQ8IWN6 122 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 TRBV7-3A0A075B6L6 115 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 TRAV21A0A0B4J279 112 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 DPH3P1Q9H4G8 78 aa12.53□□□□□ -0.4
PCDHGA11-202ENST00000518882 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.41
PCDHGA11-202ENST00000518882 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
PCDHGA11-202ENST00000518882 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
PCDHGA11-202ENST00000518882 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
PCDHGA11-202ENST00000518882 GNRH2O43555 120 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 MGPP08493 103 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 ASIPP42127 132 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 C20orf78Q9BR46 151 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 BAALCQ8WXS3 180 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 MAP1AP78559 2803 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA11-202ENST00000518882 IGKV3-7A0A075B6H7 116 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 OR11H12B2RN74 326 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 CRIP2P52943 208 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 WFDC2Q14508 124 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 C2orf66Q6UXQ4 117 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 FAM19A4Q96LR4 140 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 H3BMG7 143 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 OVOL1O14753 267 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 SLC25A16P16260 332 aa12.5□□□□□ -0.41
PCDHGA11-202ENST00000518882 NDUFA4O00483 81 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms