RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GRIN2AQ12879 1464 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 MBD5Q9P267 1494 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 C3orf85A0A1B0GTC6 90 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 EFCAB10A6NFE3 127 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 ZNF670-ZNF695F2Z2N8 137 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 NPFFO15130 113 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 NCR2O95944 276 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 IGHV3-33P01772 117 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 COX7CP15954 63 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 CIRBPQ14011 172 aaKnown RBP0.76□□□□□ -2.29
SQLE-202ENST00000518604 GLIPR1L1Q6UWM5 242 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 CASC2Q6XLA1 102 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 OR10AC1Q8NH08 325 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 AP1S3Q96PC3 154 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 CALML5Q9NZT1 146 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 CNTRLQ7Z7A1 2325 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 AKAP11Q9UKA4 1901 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 PLXNA2O75051 1894 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 KIF13AQ9H1H9 1805 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 CASZ1Q86V15 1759 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 PTPRMP28827 1452 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 A0A1B0GV90 55 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 LINC00587B1AMM8 73 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 F8W1H4 67 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 M0R2Z0 102 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 CDC42EP2O14613 210 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 IGLV3-1P01715 115 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 PCBD1P61457 104 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 NCS1P62166 190 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 CLLU1Q5K131 121 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 CTAGE3PQ8IX95 158 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 C10orf111Q8N326 155 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 OR10AG1Q8NH19 301 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 CIB3Q96Q77 187 aaPredicted RBP0.75□□□□□ -2.29
SQLE-202ENST00000518604 TSC22D3Q99576 134 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 VPS25Q9BRG1 176 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 PAIP2BQ9ULR5 123 aaKnown RBP0.75□□□□□ -2.29
SQLE-202ENST00000518604 PTPRDP23468 1912 aa0.75□□□□□ -2.29
SQLE-202ENST00000518604 CHD3Q12873 2000 aaKnown RBP0.74□□□□□ -2.29
SQLE-202ENST00000518604 TRBV20-1A0A075B6N2 111 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 LOC107984156A0A0G2JMH3 177 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 A0A0J9YY99 117 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 H3BRM9 83 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 M0R2P5 195 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 GNG7O60262 68 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 EDF1O60869 148 aaKnown RBP0.74□□□□□ -2.29
SQLE-202ENST00000518604 SMIM24O75264 130 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 IGF2P01344 180 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 HIST1H1BP16401 226 aaKnown RBP0.74□□□□□ -2.29
SQLE-202ENST00000518604 RRAS2P62070 204 aaPredicted RBP0.74□□□□□ -2.29
SQLE-202ENST00000518604 PLGLB1Q02325 96 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 NEDD8Q15843 81 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 CSAG1Q6PB30 78 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 LINC00575Q6W349 94 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 ARL17AQ8IVW1 177 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 MAGOHBQ96A72 148 aaKnown RBP0.74□□□□□ -2.29
SQLE-202ENST00000518604 LINC00470Q9BZP3 86 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 ATG2AQ2TAZ0 1938 aa0.74□□□□□ -2.29
SQLE-202ENST00000518604 UHRF1BP1LA0JNW5 1464 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 TMEM2Q9UHN6 1383 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 ZGRF1Q86YA3 2104 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 NALCNQ8IZF0 1738 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 IGHV1-24A0A0C4DH33 117 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 LOC100130705A0A1B0GUX0 176 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 IFITM5A6NNB3 132 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 ADCYAP1P18509 176 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 CKS2P33552 79 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 ETV6P41212 452 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 CCSMST1Q4G0I0 132 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 RPL13AP3Q6NVV1 102 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 MMGT1Q8N4V1 131 aa0.73□□□□□ -2.29
SQLE-202ENST00000518604 BCORL1Q5H9F3 1711 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 IBTKQ9P2D0 1353 aaPredicted RBP0.72□□□□□ -2.29
SQLE-202ENST00000518604 QRICH2Q9H0J4 1663 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 PNMA8CA0A1B0GUJ8 204 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 SPAARA0A1B0GVQ0 90 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 JMJD7-PLA2G4BH0Y9G9 81 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 K7ERU9 68 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 DLEU1O43261 78 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 KLF7O75840 302 aaPredicted RBP0.72□□□□□ -2.29
SQLE-202ENST00000518604 SULT1C4O75897 302 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 PPYP01298 95 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 PDE6GP18545 87 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 COPZ1P61923 177 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 EMX2Q04743 252 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 MIC13Q5XKP0 118 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 ATP11AUNQ6ZP68 121 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 Q6ZUT4 128 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 SNX29P2Q8IUI4 249 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 TCTEX1D1Q8N7M0 179 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 C5orf17Q8NAS9 161 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 NINQ8N4C6 2090 aa0.72□□□□□ -2.29
SQLE-202ENST00000518604 MUC22E2RYF6 1773 aaPredicted RBP0.72□□□□□ -2.29
SQLE-202ENST00000518604 ROCK2O75116 1388 aaKnown RBP0.71□□□□□ -2.3
SQLE-202ENST00000518604 CXorf51AA0A1B0GTR3 108 aa0.71□□□□□ -2.3
SQLE-202ENST00000518604 NUPR2A6NF83 97 aa0.71□□□□□ -2.3
SQLE-202ENST00000518604 IGHV3-30P01768 117 aa0.71□□□□□ -2.3
SQLE-202ENST00000518604 IGKCP01834 107 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms