RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 FOXI2Q6ZQN5 318 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 IDO2Q6ZQW0 420 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 FP248Q71RG6 208 aaPredicted RBP1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 GKN2Q86XP6 184 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 SNX29P2Q8IUI4 249 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 ATP6V0E2Q8NHE4 81 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 PP6455Q8WZ26 134 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 C14orf144Q96I85 54 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 SMIM7Q9BQ49 75 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 NOP16Q9Y3C1 178 aaKnown RBP1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 ABCA3Q99758 1704 aa1.25□□□□□ -2.21
SCARNA3-201ENST00000517097 TANC1Q9C0D5 1861 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 PHIPQ8WWQ0 1821 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 ROBO1Q9Y6N7 1651 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 TRAV12-2A0A075B6T6 113 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 CCDC179H3BU77 68 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 HYPMO75409 117 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 AKAIN1P0CW23 69 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 KRTAP13-3Q3SY46 172 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 C10orf55Q5SWW7 151 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 MIC13Q5XKP0 118 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 ATP11AUNQ6ZP68 121 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 ZNF431Q8TF32 576 aaPredicted RBP1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 C4orf3Q8WVX3 66 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 PATE1Q8WXA2 126 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 LINC00052Q96N35 136 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 PSMG3Q9BT73 122 aaPredicted RBP1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 CFTRP13569 1480 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 MYOM2P54296 1465 aa1.24□□□□□ -2.21
SCARNA3-201ENST00000517097 NWD2Q9ULI1 1742 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 ANKRD26Q9UPS8 1709 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 CCNB3Q8WWL7 1395 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 ZNF142P52746 1687 aaPredicted RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 COL4A4P53420 1690 aaPredicted RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 KIAA0100Q14667 2235 aaKnown RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 NRKQ7Z2Y5 1582 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 C20orf202A1L168 122 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 J3QLW9 94 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 CCL16O15467 120 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 SNAPC5O75971 98 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 IGKV4-1P06312 121 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 SMIM6P0DI80 62 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 RNASE3P12724 160 aaKnown RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 HIST1H1DP16402 221 aaKnown RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 ADCYAP1P18509 176 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 RBP2P50120 134 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 KRTAP10-8P60410 259 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 BTG2P78543 158 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 LINC01545Q5VT33 79 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 TEX261Q6UWH6 196 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 COA5Q86WW8 74 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 SNRNP25Q9BV90 132 aaKnown RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 ORMDL1Q9P0S3 153 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 BOKQ9UMX3 212 aaPredicted RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 RBBP6Q7Z6E9 1792 aaKnown RBP1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 DLEC1Q9Y238 1755 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 A2ML1A8K2U0 1454 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 CECR2Q9BXF3 1484 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 CTTNBP2Q8WZ74 1663 aa1.23□□□□□ -2.21
SCARNA3-201ENST00000517097 PSME4Q14997 1843 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 PRRC2BQ5JSZ5 2229 aaKnown RBP1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 F8W1H4 67 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 GNG4P50150 75 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 Q6ZRN7 208 aaPredicted RBP1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 SLC25A26Q70HW3 274 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 C5orf17Q8NAS9 161 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 VSTM2AQ8TAG5 236 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 REG4Q9BYZ8 158 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 AGPAT4-IT1Q9H0P7 198 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 RERGLQ9H628 205 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 COA4Q9NYJ1 87 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 ZFP30Q9Y2G7 519 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 MED12Q93074 2177 aa1.22□□□□□ -2.21
SCARNA3-201ENST00000517097 PZPP20742 1482 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 TRBV6-5A0A0K0K1A5 114 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 J3QRE1 110 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 IGHV3-33P01772 117 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 COX7CP15954 63 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 FAM74A1Q5RGS3 127 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 DYNLRB2Q8TF09 96 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 COPS9Q8WXC6 57 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 PPP3R2Q96LZ3 170 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 SEC11CQ9BY50 192 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 NAA60Q9H7X0 242 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 TAS2R8Q9NYW2 309 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 PHRF1Q9P1Y6 1649 aaKnown RBP1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 LOC285556D6RIA3 1793 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 TET1Q8NFU7 2136 aa1.21□□□□□ -2.22
SCARNA3-201ENST00000517097 DOCK11Q5JSL3 2073 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 ZFYVE16Q7Z3T8 1539 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 SCRIBQ14160 1630 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 TRBV6-4A0A1B0GX49 114 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 A0A1W2PRS3 328 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 H3BRM9 83 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 TPPP2P59282 170 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 PPP3R1P63098 170 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 LCE3AQ5TA76 89 aa1.2□□□□□ -2.22
SCARNA3-201ENST00000517097 OR2T2Q6IF00 324 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms