RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SYS1-DBNDD2H3BUS1 97 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 HLA-DRB1P01911 266 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 IL3P08700 152 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 PVALBP20472 110 aaPredicted RBP-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 DEFA1P59665 94 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 RPS20P60866 119 aaKnown RBP-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 HRCT1Q6UXD1 115 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 OR8J3Q8NGG0 315 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 DNAJB3Q8WWF6 145 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 C20orf27Q9GZN8 174 aa-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 SPANXB1Q9NS25 103 aaPredicted RBP-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 PCF11O94913 1555 aaKnown RBP-3.64□□□□□ -2.99
RNU6-542P-201ENST00000516405 MYH8P13535 1937 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 TCRBV3S1A0A5B6 114 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 PITX3O75364 302 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 SERPINA1P01009 418 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 APOC1P02654 83 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 BCL7BQ9BQE9 202 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 WFDC6Q9BQY6 131 aa-3.65□□□□□ -2.99
RNU6-542P-201ENST00000516405 ZCCHC11Q5TAX3 1644 aaKnown RBP-3.66□□□□□ -2.99
RNU6-542P-201ENST00000516405 MYO15AQ9UKN7 3530 aa-3.66□□□□□ -2.99
RNU6-542P-201ENST00000516405 RSU1Q15404 277 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 ALX1Q15699 326 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 DNAL1Q4LDG9 190 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 FAM151BQ6UXP7 276 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 PPP1R42Q7Z4L9 355 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 TEX29Q8N6K0 151 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 MSANTD3Q96H12 275 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 SELENOSQ9BQE4 189 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 PRTFDC1Q9NRG1 225 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 C19orf12Q9NSK7 152 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 TERF2IPQ9NYB0 399 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 MED11Q9P086 117 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 NUP155O75694 1391 aa-3.66□□□□□ -3
RNU6-542P-201ENST00000516405 A8MT66 165 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 TMEM256-PLSCR3K7ERE1 68 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 LDOC1O95751 146 aaPredicted RBP-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 COX8AP10176 69 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 DYNLT3P51808 116 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 CLDN12P56749 244 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 AP3S2P59780 193 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 UBE2BP63146 152 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 FAM45BPQ6NSW5 357 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 ALKAL1Q6UXT8 129 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 TAS2R42Q7RTR8 314 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 SLC51BQ86UW2 128 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 C20orf197Q8N268 126 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 RNASEH2CQ8TDP1 164 aaKnown RBP-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 ASB4Q9Y574 426 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 CRYBG3Q68DQ2 2970 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 MRC1P22897 1456 aa-3.67□□□□□ -3
RNU6-542P-201ENST00000516405 CDC42BPGQ6DT37 1551 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 TRAV26-2A0A0B4J265 109 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 SUPT3HB4E1H0 165 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 CNIH1O95406 144 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 OR5G3P0C626 314 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 UBE2D3P61077 147 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 SNRPD2P62316 118 aaKnown RBP-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 UBE2D2P62837 147 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 IMPG1Q17R60 797 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 OR2T2Q6IF00 324 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 C2orf50Q96LR7 162 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 CACYBPQ9HB71 228 aaKnown RBP-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 RABL2BQ9UNT1 228 aa-3.68□□□□□ -3
RNU6-542P-201ENST00000516405 CST7O76096 145 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 DNAJB13P59910 316 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 POU6F1Q14863 301 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 HSP90AA4PQ58FG1 418 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 CYP2G1PQ6ZSU1 146 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 TMEM86BQ8N661 226 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 ENPP5Q9UJA9 477 aa-3.69□□□□□ -3
RNU6-542P-201ENST00000516405 TULP4Q9NRJ4 1543 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 MYH7P12883 1935 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 PIK3C2AO00443 1686 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 CXorf51AA0A1B0GTR3 108 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 K7ERJ3 54 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 RER1O15258 196 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 CST4P01036 141 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 RBP1P09455 135 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 BCAP31P51572 246 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 HIST1H3AP68431 136 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 HMGN5P82970 282 aaKnown RBP-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 CCSMST1Q4G0I0 132 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 HIST2H3PS2Q5TEC6 136 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 TMEM91Q6ZNR0 172 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 STX19Q8N4C7 294 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 ANKRD29Q8N6D5 301 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 TEX37Q96LM6 180 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 VPS29Q9UBQ0 182 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 TPRKBQ9Y3C4 175 aa-3.7□□□□□ -3
RNU6-542P-201ENST00000516405 MYH2Q9UKX2 1941 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 A0A1B0GV50 99 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 EVPLLA8MZ36 301 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 KPNA3O00505 521 aaPredicted RBP-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 TNFAIP8O95379 198 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 IL18Q14116 193 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 RRN3P1Q2M238 152 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 BCL2L15Q5TBC7 163 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 C3orf33Q6P1S2 294 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 KRT222Q8N1A0 295 aa-3.71□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms