RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SLC35B1P78383 322 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 COL5A1-AS1Q5SY13 56 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 TCF24Q7RTU0 167 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 PRNTQ86SH4 94 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 Q8N9W7 124 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 GTSF1Q8WW33 167 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 PGLYRP4Q96LB8 373 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 C2orf48Q96LS8 159 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 PMCHL2Q9BQD1 86 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 SLC50A1Q9BRV3 221 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 CNFNQ9BYD5 112 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 ST20Q9HBF5 79 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 RABAC1Q9UI14 185 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 HSPB8Q9UJY1 196 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 LAMTOR2Q9Y2Q5 125 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 U3KQK5 164 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 PTPRQQ9UMZ3 2332 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 MAP1BP46821 2468 aaKnown RBP2.82□□□□□ -1.96
CAST-242ENST00000515063 RIF1Q5UIP0 2472 aaKnown RBP2.82□□□□□ -1.96
CAST-242ENST00000515063 NAV2Q8IVL1 2488 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 PKDREJQ9NTG1 2253 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 APC2O95996 2303 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 ROS1P08922 2347 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 GVINP1Q7Z2Y8 2422 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 CEP250Q9BV73 2442 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 ANKHD1Q8IWZ3 2542 aaKnown RBP2.81□□□□□ -1.96
CAST-242ENST00000515063 DSPP15924 2871 aaKnown RBP2.81□□□□□ -1.96
CAST-242ENST00000515063 FRYQ5TBA9 3013 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 WDFY4Q6ZS81 3184 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 TRBV7-1A0A0A6YYK4 115 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 IGHV3-21A0A0B4J1V1 117 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 IGHV7-81A0A0B4J1V7 117 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 IGHV1-24A0A0C4DH33 117 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 TMEM189A5PLL7 270 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 SYS1-DBNDD2H3BUS1 97 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 CCL24O00175 119 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 DLEU1O43261 78 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 PPBPP02775 128 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 CTSGP08311 255 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 NTF3P20783 257 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 HNRNPA3P51991 378 aaKnown RBP2.81□□□□□ -1.96
CAST-242ENST00000515063 HIST1H1AQ02539 215 aaPredicted RBP2.81□□□□□ -1.96
CAST-242ENST00000515063 HES1Q14469 280 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 TDRG1Q3Y452 100 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 Q56UQ5 140 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 FAM120AOSQ5T036 256 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 FAM104BQ5XKR9 115 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 LEMD1Q68G75 181 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 EBLN2Q6P2I7 272 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 RNASEKQ6P5S7 137 aaKnown RBP2.81□□□□□ -1.96
CAST-242ENST00000515063 LHFPL4Q7Z7J7 247 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 EXOC3-AS1Q8N2X6 119 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 FAM19A2Q8N3H0 131 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 OR1N2Q8NGR9 330 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 OR10AG1Q8NH19 301 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 ZNF502Q8TBZ5 544 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 PIFOQ8TCI5 191 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 ZC2HC1AQ96GY0 325 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 SPAG8Q99932 426 aaPredicted RBP2.81□□□□□ -1.96
CAST-242ENST00000515063 MAP1LC3CQ9BXW4 147 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 RPH3ALQ9UNE2 315 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 HILPDAQ9Y5L2 63 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 LENEPQ9Y5L5 61 aa2.81□□□□□ -1.96
CAST-242ENST00000515063 TRAV8-1A0A0A6YYK1 113 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 TRBV7-9A0A0J9YWB2 115 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 CENPVL3A0A0U1RRI6 287 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 LINC01546A6NGU7 62 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 OR4C46A6NHA9 309 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 NCBP2LA6PVI3 153 aaKnown RBP2.8□□□□□ -1.96
CAST-242ENST00000515063 FABP5P3A8MUU1 101 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 HSBP1L1C9JCN9 74 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 H3BUA1 57 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 NDUFS8O00217 210 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 SH2D1AO60880 128 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 ARMS2P0C7Q2 107 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 IGLC6P0CF74 106 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 APELAP0DMC3 54 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 IGLL1P15814 213 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 TSPOP30536 169 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 CRIP1P50238 77 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 DLX1P56177 255 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 NDPQ00604 133 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 KLRD1Q13241 179 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 LGALS9BQ3B8N2 356 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 LGALS9CQ6DKI2 356 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 Q6ZN92 141 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 FA2HQ7L5A8 372 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 ORMDL3Q8N138 153 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 DEFB125Q8N687 156 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 RNASE8Q8TDE3 154 aaKnown RBP2.8□□□□□ -1.96
CAST-242ENST00000515063 ORAOV1Q8WV07 137 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 EEF1AKMT3Q96AZ1 226 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 OVOL2Q9BRP0 275 aa2.8□□□□□ -1.96
CAST-242ENST00000515063 AKAP13Q12802 2813 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 USP9XQ93008 2570 aaPredicted RBP2.79□□□□□ -1.96
CAST-242ENST00000515063 FAM223BA6NKX1 122 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 F8WDY8 70 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 H3BTX0 84 aa2.79□□□□□ -1.96
CAST-242ENST00000515063 K7EQD1 137 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms