RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
SNHG4-208ENST00000514110 GOLT1AQ6ZVE7 132 aa8.25□□□□□ -1.09
SNHG4-208ENST00000514110 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
SNHG4-208ENST00000514110 TXNDC17Q9BRA2 123 aa8.25□□□□□ -1.09
SNHG4-208ENST00000514110 MARVELD1Q9BSK0 173 aa8.25□□□□□ -1.09
SNHG4-208ENST00000514110 PTTG2Q9NZH5 202 aa8.25□□□□□ -1.09
SNHG4-208ENST00000514110 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
SNHG4-208ENST00000514110 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 C9JCJ5 164 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 F6UZH7 168 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 K7EP13 123 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 M0R2P5 195 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 TYMSP04818 313 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 OR4C5Q8NGB2 326 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 CMTM2Q8TAZ6 248 aa8.24□□□□□ -1.09
SNHG4-208ENST00000514110 TRAV21A0A0B4J279 112 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 SSNA1O43805 119 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 CRYGDP07320 174 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 PET100P0DJ07 73 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 RAB2AP61019 212 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 GNG5P63218 68 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 FAM74A1Q5RGS3 127 aa8.23□□□□□ -1.09
SNHG4-208ENST00000514110 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
SNHG4-208ENST00000514110 GATA1P15976 413 aaPredicted RBP8.22□□□□□ -1.09
SNHG4-208ENST00000514110 ACOT6Q3I5F7 207 aaPredicted RBP8.22□□□□□ -1.09
SNHG4-208ENST00000514110 PQLC2Q6ZP29 291 aa8.22□□□□□ -1.09
SNHG4-208ENST00000514110 SGK494Q96LW2 274 aa8.22□□□□□ -1.09
SNHG4-208ENST00000514110 TREM1Q9NP99 234 aa8.22□□□□□ -1.09
SNHG4-208ENST00000514110 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 A0A1W2PPV4 95 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 Q5VSD8 79 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 NHLRC2Q8NBF2 726 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 KCNS1Q96KK3 526 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.1
SNHG4-208ENST00000514110 FAT1Q14517 4588 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 ARL14EPLP0DKL9 152 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 GCSHP23434 173 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 ZNF80P51504 273 aaPredicted RBP8.2□□□□□ -1.1
SNHG4-208ENST00000514110 TIRAPP58753 221 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 SH2D6Q7Z4S9 175 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 C10orf126Q8N4M7 172 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 OR10G9Q8NGN4 311 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 OR10G7Q8NGN6 311 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 ASB13Q8WXK3 278 aa8.2□□□□□ -1.1
SNHG4-208ENST00000514110 IGHV3-38A0A0C4DH36 116 aa8.19□□□□□ -1.1
SNHG4-208ENST00000514110 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
SNHG4-208ENST00000514110 FBLL1A6NHQ2 334 aaKnown RBP8.19□□□□□ -1.1
SNHG4-208ENST00000514110 SMR3BP02814 79 aaPredicted RBP8.19□□□□□ -1.1
SNHG4-208ENST00000514110 PPT1P50897 306 aa8.19□□□□□ -1.1
SNHG4-208ENST00000514110 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
SNHG4-208ENST00000514110 CFAP126Q5VTH2 177 aa8.19□□□□□ -1.1
SNHG4-208ENST00000514110 HERC1Q15751 4861 aa8.19□□□□□ -1.1
SNHG4-208ENST00000514110 IGHV3-73A0A0B4J1V6 119 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 A6NHS1 94 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 RS1O15537 224 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 CDC34P49427 236 aaPredicted RBP8.18□□□□□ -1.1
SNHG4-208ENST00000514110 HAMPP81172 84 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 TMEM75Q8N9X5 138 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 FRZBQ92765 325 aa8.18□□□□□ -1.1
SNHG4-208ENST00000514110 PSCAO43653 123 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 GCGP01275 180 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 IGLV2-11P01706 119 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 TCRAP04437 139 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
SNHG4-208ENST00000514110 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 DEFA1P59665 94 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 DEFA3P59666 94 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 OR10J3Q5JRS4 329 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 C5orf17Q8NAS9 161 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 HSD17B11Q8NBQ5 300 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 SUN5Q8TC36 379 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 C9orf85Q96MD7 179 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 NDFIP1Q9BT67 221 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
SNHG4-208ENST00000514110 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 SERTM2A0A1B0GWG4 89 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 PGPEP1LA6NFU8 196 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 TAAR5O14804 337 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 IGHV3-30P01768 117 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 IGHV3-33P01772 117 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 IGHV3-30-3P0DP02 117 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 IGHV3-30-5P0DP03 117 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
SNHG4-208ENST00000514110 GCHFRP30047 84 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 RHOHQ15669 191 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 OR2G3Q8NGZ4 309 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 PRADC1Q9BSG0 188 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 Q9HAA7 133 aa8.16□□□□□ -1.1
SNHG4-208ENST00000514110 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms