RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 UPK3BQ9BT76 320 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 HLA-DRB4X5D2U9 266 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 A0A1W2PPV4 95 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 B4DEV8 164 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 SOCS3O14543 225 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 PLA2G1BP04054 148 aaKnown RBP6.23□□□□□ -1.41
NUP54-211ENST00000512151 IGLC2P0DOY2 106 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 DEFB130BP0DP73 79 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 DEFB130AP0DP74 79 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 FGF8P55075 233 aaPredicted RBP6.23□□□□□ -1.41
NUP54-211ENST00000512151 KRTAP10-4P60372 401 aaPredicted RBP6.23□□□□□ -1.41
NUP54-211ENST00000512151 PNRC1Q12796 327 aaPredicted RBP6.23□□□□□ -1.41
NUP54-211ENST00000512151 ESRGQ1W209 222 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 IGFL4Q6B9Z1 124 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 HIST1H2BAQ96A08 127 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 FXYD5Q96DB9 178 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 TVP23CQ96ET8 276 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 TMEM70Q9BUB7 260 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 OR51M1Q9H341 326 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 MANBALQ9NQG1 85 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 TMEM14CQ9P0S9 112 aa6.23□□□□□ -1.41
NUP54-211ENST00000512151 A0A087X0K7 114 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 TRAV8-2A0A0B4J237 113 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 TMEM250H0YL14 139 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 SLC17A3O00476 420 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 NDUFB4O95168 129 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 MT-ND4LP03901 98 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 OR10J4P0C629 311 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 RPL7P18124 248 aaKnown RBP6.22□□□□□ -1.41
NUP54-211ENST00000512151 AKR1C3P42330 323 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 PSMB3P49720 205 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 MEF2BQ02080 365 aaPredicted RBP6.22□□□□□ -1.41
NUP54-211ENST00000512151 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 YPEL4Q96NS1 127 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 TXNDC17Q9BRA2 123 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 PAXXQ9BUH6 204 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 TMPRSS5Q9H3S3 457 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 PRELID1Q9Y255 219 aa6.22□□□□□ -1.41
NUP54-211ENST00000512151 MRPS16Q9Y3D3 137 aaKnown RBP6.22□□□□□ -1.41
NUP54-211ENST00000512151 OR7C2O60412 319 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 ARL14EPLP0DKL9 152 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 PRB4P10163 310 aaPredicted RBP6.21□□□□□ -1.41
NUP54-211ENST00000512151 HIST1H1EP10412 219 aaKnown RBP6.21□□□□□ -1.41
NUP54-211ENST00000512151 GCHFRP30047 84 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 S100A7P31151 101 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 ASIPP42127 132 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 GALR1P47211 349 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 RRN3P1Q2M238 152 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 S100A7AQ86SG5 101 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 C20orf173Q96LM9 149 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 GPR82Q96P67 336 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 SDF2L1Q9HCN8 221 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 NRN1Q9NPD7 142 aa6.21□□□□□ -1.41
NUP54-211ENST00000512151 TNXBP22105 4242 aa6.21□□□□□ -1.42
NUP54-211ENST00000512151 TRBV19A0A075B6N1 114 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 PLAC8L1A1L4L8 177 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 LYRM9A8MSI8 78 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 ZNF705GA8MUZ8 300 aaPredicted RBP6.2□□□□□ -1.42
NUP54-211ENST00000512151 NBEAP1P0C6P0 100 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 CEBPGP53567 150 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 TAS2R45P59539 299 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 PQLC2Q6ZP29 291 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 RNF182Q8N6D2 247 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 BLNKQ8WV28 456 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 ZNF331Q9NQX6 463 aaPredicted RBP6.2□□□□□ -1.42
NUP54-211ENST00000512151 TMEM242Q9NWH2 141 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 GOLT1BQ9Y3E0 138 aa6.2□□□□□ -1.42
NUP54-211ENST00000512151 CXorf1O96002 111 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 ATP5G1P05496 136 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 RAB5AP20339 215 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 ATP5G3P48201 142 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 UBE2L3P68036 154 aaKnown RBP6.19□□□□□ -1.42
NUP54-211ENST00000512151 SMUG1Q53HV7 270 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 C16orf92Q96LL3 132 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 NAT8Q9UHE5 227 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 RNF24Q9Y225 148 aa6.19□□□□□ -1.42
NUP54-211ENST00000512151 ZNF727A8MUV8 499 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 C1orf196B1AJZ1 125 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 PRAC2D3DTV9 90 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 F6UZH7 168 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 PDE6DO43924 150 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 PAGE4O60829 102 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 MEOX2P50222 304 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 RAB5BP61020 215 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
NUP54-211ENST00000512151 RANP62826 216 aaKnown RBP6.18□□□□□ -1.42
NUP54-211ENST00000512151 TMEM241Q24JQ0 296 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 SMIM7Q9BQ49 75 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 BIN3Q9NQY0 253 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 ARL2-SNX15V9GYD0 113 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 TRAV26-1A0A087WT03 109 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 A0A0J9YY99 117 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 CBY3A6NI87 242 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 F6UB75 175 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 M0R3E3 92 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 ISLRO14498 428 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 PAX4O43316 350 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms