RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 FRAS1Q86XX4 4008 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 NUDT3O95989 172 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 LTAP01374 205 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 IFNA7P01567 189 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 OR5I1Q13606 314 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 TMEM183BQ1AE95 376 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 COX8CQ7Z4L0 72 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 LINC00467Q9BRT7 94 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 TREM1Q9NP99 234 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 MDFICQ9P1T7 246 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 LENEPQ9Y5L5 61 aa6.16□□□□□ -1.42
PDLIM5-213ENST00000509357 IGLV2-18A0A075B6J9 118 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 IGKV3D-20A0A0C4DH25 116 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 SERTM2A0A1B0GWG4 89 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GAGE12BA1L429 117 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 RAB19A4D1S5 217 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 RGS13O14921 159 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GNRH2O43555 120 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GAGE7O76087 117 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GCGP01275 180 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GAGE12FP0CL80 117 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GAGE12GP0CL81 117 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 GAGE12IP0CL82 117 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 ANXA2RQ3ZCQ2 193 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 ZNF506Q5JVG8 444 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 LINC00612Q8N6U2 182 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 HIST1H2BAQ96A08 127 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 MANBALQ9NQG1 85 aa6.15□□□□□ -1.42
PDLIM5-213ENST00000509357 TRGV2A0A075B6R0 118 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 IGHV1OR15-1A0A075B7D0 117 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 TYMSP04818 313 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 AKR1C3P42330 323 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 RPL35P42766 123 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 MEF2BQ02080 365 aaPredicted RBP6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 RNF212Q495C1 297 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 TOR2AQ5JU69 321 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 EIF4E3Q8N5X7 224 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 NKX6-2Q9C056 277 aaPredicted RBP6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 GSN-AS1Q9NRJ2 163 aa6.14□□□□□ -1.43
PDLIM5-213ENST00000509357 TRGV1A0A0A0MS02 117 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 IGHV3-16A0A0C4DH30 117 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 A0A0J9YY99 117 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 RBFOX3A6NFN3 312 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 K7EN84 100 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 SH2D1AO60880 128 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 RNASE3P12724 160 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 CCL18P55774 89 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 RPL19P84098 196 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 TDRG1Q3Y452 100 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 Q6ZTI0 123 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 FMC1Q96HJ9 113 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 FAM210AQ96ND0 272 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 VAX2Q9UIW0 290 aa6.13□□□□□ -1.43
PDLIM5-213ENST00000509357 TRAV26-1A0A087WT03 109 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 PFN1P07737 140 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 SRP19P09132 144 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 HOXA5P20719 270 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 PPT1P50897 306 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 TCL1AP56279 114 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 DAZ2Q13117 558 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 SMUG1Q53HV7 270 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 CENPWQ5EE01 88 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 SOHLH1Q5JUK2 328 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 TMEM183AQ8IXX5 376 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 NAGKQ9UJ70 344 aa6.12□□□□□ -1.43
PDLIM5-213ENST00000509357 TRAV21A0A0B4J279 112 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 KRBOX1C9JBD0 128 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 SPINK4O60575 86 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 LGALS9BQ3B8N2 356 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 LINC00336Q6ZUF6 198 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 C9orf85Q96MD7 179 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 PARLQ9H300 379 aa6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 MRPL16Q9NX20 251 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-213ENST00000509357 C19orf71A6NCJ1 209 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 K7EQM0 130 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 M0R036 132 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 FAM3BP58499 235 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 UBE2G1P62253 170 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 ZNF415Q09FC8 603 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 SAPCD1Q5SSQ6 148 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 IBA57Q5T440 356 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 FAM159AQ6UWV7 190 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 BAGE2Q86Y30 109 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 MED9Q9NWA0 146 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 ZFP30Q9Y2G7 519 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
PDLIM5-213ENST00000509357 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 TMSB15BA0A087X1C1 80 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 GRIFINA4D1Z8 144 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 FBLL1A6NHQ2 334 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 PRSS29PA6NIE9 313 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms