RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C7orf71A4D174 169 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 SLC17A3O00476 420 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 AGPAT2O15120 278 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 MBP02144 154 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 RAB2AP61019 212 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
NEDD9-211ENST00000508546 BPIFA4PQ86YQ2 179 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 WFDC10BQ8IUB3 73 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 EIF4E3Q8N5X7 224 aaKnown RBP6.3□□□□□ -1.4
NEDD9-211ENST00000508546 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 VGLL1Q99990 258 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 KLF12Q9Y4X4 402 aa6.3□□□□□ -1.4
NEDD9-211ENST00000508546 RAB19A4D1S5 217 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 KLLNB2CW77 178 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 CRYGDP07320 174 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 H2AFB1P0C5Y9 115 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 RPL29P47914 159 aaKnown RBP6.29□□□□□ -1.4
NEDD9-211ENST00000508546 FHL2Q14192 279 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 ACOT6Q3I5F7 207 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-211ENST00000508546 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 Q6ZSA8 131 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 LINC00305Q7Z4B0 112 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 Q8N814 137 aa6.29□□□□□ -1.4
NEDD9-211ENST00000508546 MRPL32Q9BYC8 188 aaKnown RBP6.29□□□□□ -1.4
NEDD9-211ENST00000508546 CTXND1A0A1B0GTU2 59 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 A0A1B0GV50 99 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 MAP1LC3B2A6NCE7 125 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 PSCAO43653 123 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 OXTP01178 125 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 SNRPCP09234 159 aaKnown RBP6.28□□□□□ -1.4
NEDD9-211ENST00000508546 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 SRIP30626 198 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 CDC34P49427 236 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-211ENST00000508546 ZNF726P1Q15940 193 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 TOR2AQ5JU69 321 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 FAM122CQ6P4D5 195 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 UQCC3Q6UW78 93 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 IQCF2Q8IXL9 164 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 OR10G4Q8NGN3 311 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 OR10G9Q8NGN4 311 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 OR10G7Q8NGN6 311 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 SFT2D1Q8WV19 159 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 ACTR3CQ9C0K3 210 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-211ENST00000508546 MAP1LC3BQ9GZQ8 125 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 SLC39A9Q9NUM3 307 aa6.28□□□□□ -1.4
NEDD9-211ENST00000508546 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 H3BQ15 152 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 H3BTX0 84 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 K7EQD1 137 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 ZNF253O75346 499 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 GUK1Q16774 197 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 GCSAMLQ5JQS6 135 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 MORN5Q5VZ52 161 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 MBD3L1Q8WWY6 194 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 MRPL53Q96EL3 112 aaKnown RBP6.27□□□□□ -1.41
NEDD9-211ENST00000508546 FAM19A4Q96LR4 140 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 FAM210AQ96ND0 272 aa6.27□□□□□ -1.41
NEDD9-211ENST00000508546 MRPL16Q9NX20 251 aaKnown RBP6.27□□□□□ -1.41
NEDD9-211ENST00000508546 TRAV5A0A0B4J249 113 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 TRGV4A0A0C4DH28 118 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 A0A1W2PPV4 95 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 IBA57-AS1B1ANH7 110 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 ORM1P02763 201 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 CRISP2P16562 243 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 FGF8P55075 233 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-211ENST00000508546 ZNF415Q09FC8 603 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 BTN1A1Q13410 526 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 TMEM37Q8WXS4 190 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 RAB24Q969Q5 203 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 TXNDC17Q9BRA2 123 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 TREM1Q9NP99 234 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 TNXBP22105 4242 aa6.26□□□□□ -1.41
NEDD9-211ENST00000508546 IGHV3-38A0A0C4DH36 116 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 KRBOX1C9JBD0 128 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 HMGB3O15347 200 aaKnown RBP6.25□□□□□ -1.41
NEDD9-211ENST00000508546 COX7A2P2O60397 106 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 IFNA1P01562 189 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 GYPEP15421 78 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 ASIPP42127 132 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 TIRAPP58753 221 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-211ENST00000508546 CCL20P78556 96 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 SRSF3P84103 164 aaKnown RBP6.25□□□□□ -1.41
NEDD9-211ENST00000508546 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 C10orf113Q5VZT2 155 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 PFDN5Q99471 154 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 EIF5A2Q9GZV4 153 aaKnown RBP6.25□□□□□ -1.41
NEDD9-211ENST00000508546 AGPAT4-IT1Q9H0P7 198 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 TP53TG3Q9ULZ0 132 aa6.25□□□□□ -1.41
NEDD9-211ENST00000508546 IGHV1OR15-1A0A075B7D0 117 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 M0R3E3 92 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 EIF3GO75821 320 aaKnown RBP eCLIP6.24□□□□□ -1.41
NEDD9-211ENST00000508546 GPX1P07203 203 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 BCL2P10415 239 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 RNASE4P34096 147 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms