RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 C11orf21Q9P2W6 132 aa12.85□□□□□ -0.35
PDLIM7-216ENST00000506537 SPINK4O60575 86 aa12.84□□□□□ -0.35
PDLIM7-216ENST00000506537 PPT1P50897 306 aa12.84□□□□□ -0.35
PDLIM7-216ENST00000506537 LGALS9CQ6DKI2 356 aa12.84□□□□□ -0.35
PDLIM7-216ENST00000506537 FAM159AQ6UWV7 190 aa12.84□□□□□ -0.35
PDLIM7-216ENST00000506537 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
PDLIM7-216ENST00000506537 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
PDLIM7-216ENST00000506537 F5H768 121 aa12.83□□□□□ -0.36
PDLIM7-216ENST00000506537 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
PDLIM7-216ENST00000506537 SMUG1Q53HV7 270 aa12.83□□□□□ -0.36
PDLIM7-216ENST00000506537 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
PDLIM7-216ENST00000506537 FAM210BQ96KR6 192 aa12.83□□□□□ -0.36
PDLIM7-216ENST00000506537 TRGV11A0A075B6L2 103 aa12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 SCO2A0A1W2PP80 73 aa12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 GNRH2O43555 120 aa12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 TYMSP04818 313 aa12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 PFN1P07737 140 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 FMC1Q96HJ9 113 aa12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 GNG13Q9P2W3 67 aa12.82□□□□□ -0.36
PDLIM7-216ENST00000506537 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
PDLIM7-216ENST00000506537 HOXA5P20719 270 aa12.81□□□□□ -0.36
PDLIM7-216ENST00000506537 AKR1C3P42330 323 aa12.81□□□□□ -0.36
PDLIM7-216ENST00000506537 ALKAL2Q6UX46 152 aa12.81□□□□□ -0.36
PDLIM7-216ENST00000506537 MANBALQ9NQG1 85 aa12.81□□□□□ -0.36
PDLIM7-216ENST00000506537 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
PDLIM7-216ENST00000506537 ZC2HC1AQ96GY0 325 aa12.8□□□□□ -0.36
PDLIM7-216ENST00000506537 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
PDLIM7-216ENST00000506537 SDF2L1Q9HCN8 221 aa12.8□□□□□ -0.36
PDLIM7-216ENST00000506537 LTAP01374 205 aa12.79□□□□□ -0.36
PDLIM7-216ENST00000506537 UBE2G1P62253 170 aa12.79□□□□□ -0.36
PDLIM7-216ENST00000506537 LGALS9BQ3B8N2 356 aa12.79□□□□□ -0.36
PDLIM7-216ENST00000506537 COX8CQ7Z4L0 72 aa12.79□□□□□ -0.36
PDLIM7-216ENST00000506537 TRGV2A0A075B6R0 118 aa12.78□□□□□ -0.36
PDLIM7-216ENST00000506537 CRIP1P50238 77 aa12.78□□□□□ -0.36
PDLIM7-216ENST00000506537 KCNS1Q96KK3 526 aa12.78□□□□□ -0.36
PDLIM7-216ENST00000506537 ZFP30Q9Y2G7 519 aa12.78□□□□□ -0.36
PDLIM7-216ENST00000506537 TEX46H3BTG2 121 aa12.77□□□□□ -0.37
PDLIM7-216ENST00000506537 SPXQ9BT56 116 aa12.77□□□□□ -0.37
PDLIM7-216ENST00000506537 MUC4Q99102 2169 aa12.77□□□□□ -0.37
PDLIM7-216ENST00000506537 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
PDLIM7-216ENST00000506537 OR5I1Q13606 314 aa12.76□□□□□ -0.37
PDLIM7-216ENST00000506537 C15orf53Q8NAA6 179 aa12.76□□□□□ -0.37
PDLIM7-216ENST00000506537 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
PDLIM7-216ENST00000506537 C11orf52Q96A22 123 aa12.76□□□□□ -0.37
PDLIM7-216ENST00000506537 TRAV26-1A0A087WT03 109 aa12.75□□□□□ -0.37
PDLIM7-216ENST00000506537 FABP5P3A8MUU1 101 aa12.75□□□□□ -0.37
PDLIM7-216ENST00000506537 SH2D1AO60880 128 aa12.75□□□□□ -0.37
PDLIM7-216ENST00000506537 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
PDLIM7-216ENST00000506537 RASL10AQ92737 203 aa12.75□□□□□ -0.37
PDLIM7-216ENST00000506537 DERL1Q9BUN8 251 aa12.75□□□□□ -0.37
PDLIM7-216ENST00000506537 DNAH10Q8IVF4 4471 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 M0R2P5 195 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 S100A9P06702 114 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 P0DMU3 169 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 BCL2P10415 239 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 ZNF674Q2M3X9 581 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 C9orf85Q96MD7 179 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
PDLIM7-216ENST00000506537 A0A0J9YY99 117 aa12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 NUDT3O95989 172 aa12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 RNASE3P12724 160 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 RPL35P42766 123 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 MEF2BQ02080 365 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 FAM162BQ5T6X4 162 aa12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 POM121L12Q8N7R1 296 aa12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 TXNDC17Q9BRA2 123 aa12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 MLST8Q9BVC4 326 aa12.73□□□□□ -0.37
PDLIM7-216ENST00000506537 IFNA1P01562 189 aa12.72□□□□□ -0.37
PDLIM7-216ENST00000506537 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
PDLIM7-216ENST00000506537 ZNF575Q86XF7 245 aa12.72□□□□□ -0.37
PDLIM7-216ENST00000506537 VSIG2Q96IQ7 327 aa12.72□□□□□ -0.37
PDLIM7-216ENST00000506537 B4DEV8 164 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 M0R036 132 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 ORM1P02763 201 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 BLOC1S1P78537 153 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 FHL2Q14192 279 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 BAGE2Q86Y30 109 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 LYPD6BQ8NI32 183 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 ZNF479Q96JC4 524 aa12.71□□□□□ -0.37
PDLIM7-216ENST00000506537 VAX2Q9UIW0 290 aa12.7□□□□□ -0.38
PDLIM7-216ENST00000506537 NACAE9PAV3 2078 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 FRAS1Q86XX4 4008 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 H3BNG1 76 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 PDE6DO43924 150 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 DNAH2Q9P225 4427 aa12.69□□□□□ -0.38
PDLIM7-216ENST00000506537 PGPEP1LA6NFU8 196 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 C9JCJ5 164 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 ASIPP42127 132 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 ZNF506Q5JVG8 444 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 DNLZQ5SXM8 178 aa12.68□□□□□ -0.38
PDLIM7-216ENST00000506537 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms