RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GRNP28799 593 aaKnown RBP12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 RHOHQ15669 191 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 FGF6P10767 208 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 SPRNQ5BIV9 151 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 K7EP34 96 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 NKAPP1Q8N9T2 125 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 CFHR4Q92496 578 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 DKK4Q9UBT3 224 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 IGHV4-59P01825 116 aa12.97□□□□□ -0.33
PCDHA1-203ENST00000504120 HOXD3P31249 432 aaPredicted RBP12.96□□□□□ -0.33
PCDHA1-203ENST00000504120 EDA2RQ9HAV5 297 aa12.96□□□□□ -0.33
PCDHA1-203ENST00000504120 ARFGEF3Q5TH69 2177 aa12.96□□□□□ -0.33
PCDHA1-203ENST00000504120 I3L2K1 104 aa12.96□□□□□ -0.33
PCDHA1-203ENST00000504120 ZNF747Q9BV97 191 aa12.96□□□□□ -0.33
PCDHA1-203ENST00000504120 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.34
PCDHA1-203ENST00000504120 BOD1L2Q8IYS8 172 aa12.96□□□□□ -0.34
PCDHA1-203ENST00000504120 F6UB75 175 aa12.96□□□□□ -0.34
PCDHA1-203ENST00000504120 FOXE3Q13461 319 aa12.96□□□□□ -0.34
PCDHA1-203ENST00000504120 GNRH2O43555 120 aa12.95□□□□□ -0.34
PCDHA1-203ENST00000504120 TRAV13-2A0A0B4J235 113 aa12.95□□□□□ -0.34
PCDHA1-203ENST00000504120 DKK2Q9UBU2 259 aa12.95□□□□□ -0.34
PCDHA1-203ENST00000504120 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
PCDHA1-203ENST00000504120 GP9P14770 177 aa12.95□□□□□ -0.34
PCDHA1-203ENST00000504120 SPANXA1Q9NS26 97 aa12.95□□□□□ -0.34
PCDHA1-203ENST00000504120 C2orf16Q68DN1 1984 aa12.94□□□□□ -0.34
PCDHA1-203ENST00000504120 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
PCDHA1-203ENST00000504120 A0A1W2PPM0 123 aa12.94□□□□□ -0.34
PCDHA1-203ENST00000504120 NXPH4O95158 308 aa12.94□□□□□ -0.34
PCDHA1-203ENST00000504120 K7EIM0 57 aa12.94□□□□□ -0.34
PCDHA1-203ENST00000504120 RMI2Q96E14 147 aa12.94□□□□□ -0.34
PCDHA1-203ENST00000504120 IGLV11-55A0A075B6I3 123 aa12.93□□□□□ -0.34
PCDHA1-203ENST00000504120 UTF1Q5T230 341 aa12.93□□□□□ -0.34
PCDHA1-203ENST00000504120 MORN5Q5VZ52 161 aa12.93□□□□□ -0.34
PCDHA1-203ENST00000504120 CREBBPQ92793 2442 aa12.93□□□□□ -0.34
PCDHA1-203ENST00000504120 PRSS29PA6NIE9 313 aa12.93□□□□□ -0.34
PCDHA1-203ENST00000504120 K7EP13 123 aa12.92□□□□□ -0.34
PCDHA1-203ENST00000504120 ETDBQ3ZM63 59 aa12.92□□□□□ -0.34
PCDHA1-203ENST00000504120 IGF2BP2-AS1Q96M15 143 aa12.92□□□□□ -0.34
PCDHA1-203ENST00000504120 U3KQE9 123 aa12.92□□□□□ -0.34
PCDHA1-203ENST00000504120 IGKV1-17P01599 117 aa12.92□□□□□ -0.34
PCDHA1-203ENST00000504120 ANGP03950 147 aaKnown RBP12.92□□□□□ -0.34
PCDHA1-203ENST00000504120 TMEM126AQ9H061 195 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 DOCK11Q5JSL3 2073 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 IGHV4-61A0A0C4DH41 118 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 COA6Q5JTJ3 125 aaKnown RBP12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 UBL5Q9BZL1 73 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 CCL24O00175 119 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 SPANXDQ9BXN6 97 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
PCDHA1-203ENST00000504120 RNF152Q8N8N0 203 aa12.9□□□□□ -0.34
PCDHA1-203ENST00000504120 IGFBPL1Q8WX77 278 aa12.9□□□□□ -0.34
PCDHA1-203ENST00000504120 NOP10Q9NPE3 64 aaKnown RBP12.9□□□□□ -0.34
PCDHA1-203ENST00000504120 CTSGP08311 255 aa12.9□□□□□ -0.34
PCDHA1-203ENST00000504120 PATE2Q6UY27 113 aa12.9□□□□□ -0.34
PCDHA1-203ENST00000504120 MALRD1Q5VYJ5 2156 aa12.9□□□□□ -0.34
PCDHA1-203ENST00000504120 DOCK10Q96BY6 2186 aa12.89□□□□□ -0.35
PCDHA1-203ENST00000504120 RITA1Q96K30 269 aa12.89□□□□□ -0.35
PCDHA1-203ENST00000504120 RBMY1FQ15415 496 aaKnown RBP12.89□□□□□ -0.35
PCDHA1-203ENST00000504120 RNASE13Q5GAN3 156 aaKnown RBP12.89□□□□□ -0.35
PCDHA1-203ENST00000504120 NPSP0C0P6 89 aa12.89□□□□□ -0.35
PCDHA1-203ENST00000504120 C12orf74Q32Q52 190 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 OBSL1O75147 1896 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 CRLF1O75462 422 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 RPL32P62910 135 aaKnown RBP12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 CARD19Q96LW7 228 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
PCDHA1-203ENST00000504120 PCNX2A6NKB5 2137 aa12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 COL4A4P53420 1690 aaPredicted RBP12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 A0A096LPF7 62 aa12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 K7ERJ3 54 aa12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 BUB3O43684 328 aa12.87□□□□□ -0.35
PCDHA1-203ENST00000504120 Q8N9W7 124 aa12.86□□□□□ -0.35
PCDHA1-203ENST00000504120 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
PCDHA1-203ENST00000504120 SPRY4Q9C004 299 aa12.86□□□□□ -0.35
PCDHA1-203ENST00000504120 H3BMG7 143 aa12.86□□□□□ -0.35
PCDHA1-203ENST00000504120 GATA1P15976 413 aaPredicted RBP12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 IGKV2-29A2NJV5 120 aaPredicted RBP12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 C9orf153Q5TBE3 101 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 KLF2Q9Y5W3 355 aaPredicted RBP12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 WI2-2373I1.2A0A1W2PRP0 233 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 HERV-K104P63124 156 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 IGLV2-23P01705 113 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 FAM167A-AS1Q96KT0 104 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 DSCR8Q96T75 97 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 GTF3C1Q12789 2109 aa12.85□□□□□ -0.35
PCDHA1-203ENST00000504120 CFC1BP0CG36 223 aa12.84□□□□□ -0.35
PCDHA1-203ENST00000504120 CFC1P0CG37 223 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms