RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 LEPP41159 167 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 FOXA3P55318 350 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 FXYD7P58549 80 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 C4orf48Q5BLP8 95 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 PRR31Q5SQ13 230 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 C9orf66Q5T8R8 295 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 KCNIP4Q6PIL6 250 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 SHISA2Q6UWI4 295 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 TRPT1Q86TN4 253 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 BTF3L4Q96K17 158 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 GFRA4Q9GZZ7 299 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 NAT8BQ9UHF3 227 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 COL6A5A8TX70 2615 aa5.07□□□□□ -1.6
TOPBP1-203ENST00000503464 TRAV21A0A0B4J279 112 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 C7orf71A4D174 169 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 GRIFINA4D1Z8 144 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 FAM231BA6NCW3 169 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 A8MWL6 223 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 OR11H12B2RN74 326 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 GIG44P09565 113 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 ARMS2P0C7Q2 107 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 CTRLP40313 264 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 CDKN1BP46527 198 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 RPS10P46783 165 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 INSL3P51460 131 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 ANXA2RQ3ZCQ2 193 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 MUC21Q5SSG8 566 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 MRPL54Q6P161 138 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 C12orf54Q6X4T0 127 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 TMEM136Q6ZRR5 245 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 C3orf56Q8N813 242 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 TMEM158Q8WZ71 300 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 PGLYRP4Q96LB8 373 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 CLUHP3Q96NS8 147 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 FAM110AQ9BQ89 295 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 SRD5A3Q9H8P0 318 aa5.06□□□□□ -1.6
TOPBP1-203ENST00000503464 TRAV12-3A0A0B4J271 114 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 MUC21A0A0G2JKD1 596 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 MUC21A0A140T8X8 626 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 SPRY2O43597 315 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 ORM1P02763 201 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 TRGC2P03986 189 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 RPS20P60866 119 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 LYZL1Q6UWQ5 148 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 LURAP1LQ8IV03 231 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 ZFP82Q8N141 532 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 Q8N1Y9 231 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 MDFIQ99750 246 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 NAGKQ9UJ70 344 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
TOPBP1-203ENST00000503464 GNRH2O43555 120 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 SNAI2O43623 268 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 PRM2P04554 102 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 RNASE3P12724 160 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 TSPOP30536 169 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 TDRG1Q3Y452 100 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 DNLZQ5SXM8 178 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 DEFB125Q8N687 156 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 FER1L6-AS1Q8NA97 138 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 GATD1Q8NB37 220 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 FRZBQ92765 325 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 SSBP4Q9BWG4 385 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 CNFNQ9BYD5 112 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 PGPEP1Q9NXJ5 209 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 MSRB1Q9NZV6 116 aa5.04□□□□□ -1.6
TOPBP1-203ENST00000503464 A0A1B0GUT8 65 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 SNURFLB1AK76 121 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 H3BVH4 76 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BKO60814 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BJP06899 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 OR5AL1P0C617 328 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BOP23527 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BBP33778 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 CMC4P56277 68 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BDP58876 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 KRTAP10-11P60412 298 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HBBP68871 147 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 FABP9Q0Z7S8 132 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 SLAQ13239 276 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 OXLD1Q5BKU9 147 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 RASL11AQ6T310 242 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 ATP5L2Q7Z4Y8 100 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 STHQ8IWL8 128 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 OR10AG1Q8NH19 301 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 MCRIP2Q9BUT9 160 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 TPPP3Q9BW30 176 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 GNB1LQ9BYB4 327 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 MRPL18Q9H0U6 180 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 SCRT2Q9NQ03 307 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 PKD1L1Q8TDX9 2849 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 NACAE9PAV3 2078 aa5.03□□□□□ -1.6
TOPBP1-203ENST00000503464 IGHV4-4A0A075B6R2 117 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms