RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 F8W1H4 67 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 APOC4-APOC2K7ER74 178 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 KLF7O75840 302 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 NDUFB6O95139 128 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 APOC2P02655 101 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 PIPP12273 146 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 COX7CP15954 63 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 KRTAP12-4P60329 112 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 KRTAP6-3Q3LI67 103 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 FAM74A1Q5RGS3 127 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 C3orf62Q6ZUJ4 267 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 FP248Q71RG6 208 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 SPACA4Q8TDM5 124 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 DYNLRB2Q8TF09 96 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 SPTSSAQ969W0 71 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 MRPL57Q9BQC6 102 aaKnown RBP1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 ORMDL1Q9P0S3 153 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 PCNX2A6NKB5 2137 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 KTN1Q86UP2 1357 aaKnown RBP1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 A2ML1A8K2U0 1454 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 CFTRP13569 1480 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 KIDINS220Q9ULH0 1771 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 PLXNA3P51805 1871 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 RTTNQ86VV8 2226 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 TRBV6-8A0A0A6YYG3 113 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 A0A1W2PRS3 328 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 MCRIP1C9JLW8 97 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 H3BRM9 83 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 M0R143 59 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 GEMIN2O14893 280 aaKnown RBP1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 CCL25O15444 150 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 CCL16O15467 120 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 SNCGO76070 127 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 IFNA17P01571 189 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 IL5P05113 134 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 ADCYAP1P18509 176 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 KRTAP12-3P60328 96 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 HSD52Q0P140 79 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 RHOHQ15669 191 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 SPANXN1Q5VSR9 72 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 MRPL54Q6P161 138 aaKnown RBP1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 ZCCHC23Q6ZST2 131 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 COA5Q86WW8 74 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 SVBPQ8N300 66 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 PPDPFLQ8WWR9 84 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 LINC00052Q96N35 136 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 TMEM242Q9NWH2 141 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 ZFC3H1O60293 1989 aaKnown RBP1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 BCORL1Q5H9F3 1711 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 CUL9Q8IWT3 2517 aa1.06□□□□□ -2.24
HMGB1P35-201ENST00000503360 MYOM2P54296 1465 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 MGAMO43451 1857 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 ZFYVE16Q7Z3T8 1539 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 A6NIN4 97 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 NUPR1O60356 82 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 PIRTP0C851 137 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 IFITM1P13164 125 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 POLR2JP52435 117 aaKnown RBP1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 PKIAP61925 76 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 CATR1Q13166 79 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 C10orf55Q5SWW7 151 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 Q6AWC8 147 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 MED12LQ86YW9 2145 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 PATE1Q8WXA2 126 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 LINC00526Q96FQ7 95 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 AQP10Q96PS8 301 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 KLK9Q9UKQ9 250 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 MYH6P13533 1939 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 MYLKQ15746 1914 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 MICAL3Q7RTP6 2002 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 ADGRB3O60242 1522 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 MAPKBP1O60336 1514 aa1.05□□□□□ -2.24
HMGB1P35-201ENST00000503360 HEATR5BQ9P2D3 2071 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 ADAMTS7Q9UKP4 1686 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 COL4A2P08572 1712 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 COL24A1Q17RW2 1714 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 LAMB4A4D0S4 1761 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 A0A0J9YY99 117 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 TRBV6-5A0A0K0K1A5 114 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 TMEM30CPA0ZSE6 113 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 SPINK8P0C7L1 97 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 GNG2P59768 71 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 C9orf153Q5TBE3 101 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 RPL7L1Q6DKI1 246 aaKnown RBP1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 UNQ5815/PRO19632Q6UWF5 114 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 Q6ZS92 163 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 LINC00299Q6ZSB3 139 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 LSM10Q969L4 123 aaKnown RBP1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 TMEM141Q96I45 108 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 ALPK3Q96L96 1907 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 AKAP11Q9UKA4 1901 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 FREM1Q5H8C1 2179 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 PZPP20742 1482 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 TTC37Q6PGP7 1564 aa1.04□□□□□ -2.24
HMGB1P35-201ENST00000503360 COL11A1P12107 1806 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 MYH1P12882 1939 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 MYH13Q9UKX3 1938 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 CACNA1GO43497 2377 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms