RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 C11orf21Q9P2W6 132 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 DEFB131BA0A096LNP1 70 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 RBFOX3A6NFN3 312 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 RPL35P42766 123 aaKnown RBP11.04□□□□□ -0.64
CPNE1-228ENST00000498814 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 MLST8Q9BVC4 326 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 MDFICQ9P1T7 246 aa11.04□□□□□ -0.64
CPNE1-228ENST00000498814 DYNC2H1Q8NCM8 4307 aaKnown RBP11.04□□□□□ -0.64
CPNE1-228ENST00000498814 GNRH2O43555 120 aa11.03□□□□□ -0.64
CPNE1-228ENST00000498814 CRIP1P50238 77 aa11.03□□□□□ -0.64
CPNE1-228ENST00000498814 ZNF506Q5JVG8 444 aa11.03□□□□□ -0.64
CPNE1-228ENST00000498814 DERL1Q9BUN8 251 aa11.03□□□□□ -0.64
CPNE1-228ENST00000498814 MED9Q9NWA0 146 aa11.03□□□□□ -0.64
CPNE1-228ENST00000498814 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 SPINK4O60575 86 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 TYMSP04818 313 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 ZNF674Q2M3X9 581 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 Q6ZTI0 123 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 SPXQ9BT56 116 aa11.02□□□□□ -0.65
CPNE1-228ENST00000498814 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 SH2D1AO60880 128 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 GAGE7O76087 117 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 TCTAP57738 103 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 C18orf15Q96N68 181 aa11.01□□□□□ -0.65
CPNE1-228ENST00000498814 TRGV1A0A0A0MS02 117 aa11□□□□□ -0.65
CPNE1-228ENST00000498814 IGKV3D-20A0A0C4DH25 116 aa11□□□□□ -0.65
CPNE1-228ENST00000498814 TMEM250H0YL14 139 aa11□□□□□ -0.65
CPNE1-228ENST00000498814 NDUFS6O75380 124 aaKnown RBP11□□□□□ -0.65
CPNE1-228ENST00000498814 ATP5G1P05496 136 aa11□□□□□ -0.65
CPNE1-228ENST00000498814 SMIM12Q96EX1 92 aa11□□□□□ -0.65
CPNE1-228ENST00000498814 FAM210AQ96ND0 272 aa11□□□□□ -0.65
CPNE1-228ENST00000498814 PLECQ15149 4684 aaKnown RBP11□□□□□ -0.65
CPNE1-228ENST00000498814 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 IGLL5B9A064 214 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 ORM1P02763 201 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 HTN3P15516 51 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 GNG4P50150 75 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 CENPWQ5EE01 88 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 TOR2AQ5JU69 321 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 PCNPQ8WW12 178 aaKnown RBP10.99□□□□□ -0.65
CPNE1-228ENST00000498814 FAM210BQ96KR6 192 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 EIF5A2Q9GZV4 153 aaKnown RBP10.99□□□□□ -0.65
CPNE1-228ENST00000498814 MUC4Q99102 2169 aa10.99□□□□□ -0.65
CPNE1-228ENST00000498814 KRBOX1C9JBD0 128 aa10.98□□□□□ -0.65
CPNE1-228ENST00000498814 RASL10AQ92737 203 aa10.98□□□□□ -0.65
CPNE1-228ENST00000498814 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
CPNE1-228ENST00000498814 TRBV20OR9-2A0A075B6H5 130 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 TRGV2A0A075B6R0 118 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 B4DEV8 164 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 M0R2P5 195 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 IGLV2-8P01709 118 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 DNLZQ5SXM8 178 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 C9orf85Q96MD7 179 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 APLNQ9ULZ1 77 aa10.97□□□□□ -0.65
CPNE1-228ENST00000498814 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
CPNE1-228ENST00000498814 C9JCJ5 164 aa10.96□□□□□ -0.65
CPNE1-228ENST00000498814 F5H768 121 aa10.96□□□□□ -0.65
CPNE1-228ENST00000498814 M0R036 132 aa10.96□□□□□ -0.65
CPNE1-228ENST00000498814 RNASE3P12724 160 aaKnown RBP10.96□□□□□ -0.65
CPNE1-228ENST00000498814 ASIPP42127 132 aa10.96□□□□□ -0.65
CPNE1-228ENST00000498814 ZNF575Q86XF7 245 aa10.96□□□□□ -0.65
CPNE1-228ENST00000498814 PARLQ9H300 379 aa10.96□□□□□ -0.65
CPNE1-228ENST00000498814 PRR27Q6MZM9 219 aa10.95□□□□□ -0.66
CPNE1-228ENST00000498814 PTH2Q96A98 100 aa10.95□□□□□ -0.66
CPNE1-228ENST00000498814 NDUFAF3Q9BU61 184 aa10.95□□□□□ -0.66
CPNE1-228ENST00000498814 IL36BQ9NZH7 164 aa10.95□□□□□ -0.66
CPNE1-228ENST00000498814 LYSTQ99698 3801 aa10.94□□□□□ -0.66
CPNE1-228ENST00000498814 LCE6AA0A183 80 aa10.94□□□□□ -0.66
CPNE1-228ENST00000498814 SRP19P09132 144 aaKnown RBP10.94□□□□□ -0.66
CPNE1-228ENST00000498814 MGST1P10620 155 aaKnown RBP10.94□□□□□ -0.66
CPNE1-228ENST00000498814 HOXA5P20719 270 aa10.94□□□□□ -0.66
CPNE1-228ENST00000498814 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
CPNE1-228ENST00000498814 TMEM88Q6PEY1 159 aa10.94□□□□□ -0.66
CPNE1-228ENST00000498814 BIN3Q9NQY0 253 aa10.94□□□□□ -0.66
CPNE1-228ENST00000498814 NACAE9PAV3 2078 aa10.94□□□□□ -0.66
CPNE1-228ENST00000498814 GRIFINA4D1Z8 144 aa10.93□□□□□ -0.66
CPNE1-228ENST00000498814 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
CPNE1-228ENST00000498814 CXCL1P09341 107 aa10.93□□□□□ -0.66
CPNE1-228ENST00000498814 RAB14P61106 215 aa10.93□□□□□ -0.66
CPNE1-228ENST00000498814 OR5I1Q13606 314 aa10.93□□□□□ -0.66
CPNE1-228ENST00000498814 ZNF876PQ49A33 203 aa10.93□□□□□ -0.66
CPNE1-228ENST00000498814 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
CPNE1-228ENST00000498814 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
CPNE1-228ENST00000498814 ARMS2P0C7Q2 107 aa10.92□□□□□ -0.66
CPNE1-228ENST00000498814 IFITM2Q01629 132 aa10.92□□□□□ -0.66
CPNE1-228ENST00000498814 OCC1Q8TAD7 63 aa10.92□□□□□ -0.66
CPNE1-228ENST00000498814 SMDT1Q9H4I9 107 aa10.92□□□□□ -0.66
CPNE1-228ENST00000498814 TRAV4A0A0B4J268 109 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 H3BVH4 76 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 CEBPGP53567 150 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms