RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 HIST1H1AQ02539 215 aaPredicted RBP11.87□□□□□ -0.51
LMNA-217ENST00000498722 ACTL10Q5JWF8 245 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 Q6AWC8 147 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 ATP5L2Q7Z4Y8 100 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 ZFP82Q8N141 532 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 NUP35Q8NFH5 326 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
LMNA-217ENST00000498722 HIGD1CA8MV81 97 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 MT-ND6P03923 174 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 S100A6P06703 90 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 DEFB135Q30KP9 77 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 WWC2-AS2Q96NR7 200 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 KIR2DL5BA0A0G2JN68 375 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 KIR2DL5BA0A0G2JPC4 375 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
LMNA-217ENST00000498722 EBLN2Q6P2I7 272 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 KIR2DL5AQ8N109 375 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
LMNA-217ENST00000498722 UBE2CO00762 179 aa11.85□□□□□ -0.51
LMNA-217ENST00000498722 DUSP14O95147 198 aaKnown RBP11.85□□□□□ -0.51
LMNA-217ENST00000498722 ZNF80P51504 273 aaPredicted RBP11.85□□□□□ -0.51
LMNA-217ENST00000498722 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
LMNA-217ENST00000498722 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
LMNA-217ENST00000498722 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 HLA-DQA1P01909 254 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 ZNF705DP0CH99 300 aaPredicted RBP11.84□□□□□ -0.51
LMNA-217ENST00000498722 ZNF705BP0CI00 300 aaPredicted RBP11.84□□□□□ -0.51
LMNA-217ENST00000498722 CRISP2P16562 243 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 FABP9Q0Z7S8 132 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 MRPL54Q6P161 138 aaKnown RBP11.84□□□□□ -0.51
LMNA-217ENST00000498722 GTSF1Q8WW33 167 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 FRZBQ92765 325 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 BORCS7Q96B45 105 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 FAM19A4Q96LR4 140 aa11.84□□□□□ -0.51
LMNA-217ENST00000498722 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 F6UB75 175 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 PHOX2AO14813 284 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 SPRY2O43597 315 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 SPINK4O60575 86 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 Q6ZWC4 215 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 TRPT1Q86TN4 253 aaKnown RBP11.83□□□□□ -0.52
LMNA-217ENST00000498722 PGLYRP4Q96LB8 373 aa11.83□□□□□ -0.52
LMNA-217ENST00000498722 TRAV21A0A0B4J279 112 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 A0A0J9YX75 114 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 A0A1B0GW15 77 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BKO60814 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 ORM1P02763 201 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 S100A8P05109 93 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BJP06899 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 GPX1P07203 203 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BOP23527 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BBP33778 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 LEPP41159 167 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 DEFB1P60022 68 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HBBP68871 147 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 RIGQ13278 110 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 OVOL2Q9BRP0 275 aa11.82□□□□□ -0.52
LMNA-217ENST00000498722 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
LMNA-217ENST00000498722 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
LMNA-217ENST00000498722 GZMBP10144 247 aa11.81□□□□□ -0.52
LMNA-217ENST00000498722 RAB4BP61018 213 aa11.81□□□□□ -0.52
LMNA-217ENST00000498722 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
LMNA-217ENST00000498722 ZFAND2AQ8N6M9 145 aa11.81□□□□□ -0.52
LMNA-217ENST00000498722 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
LMNA-217ENST00000498722 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
LMNA-217ENST00000498722 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
LMNA-217ENST00000498722 TSPOP30536 169 aa11.8□□□□□ -0.52
LMNA-217ENST00000498722 GDF5OSQ5U4N7 250 aa11.8□□□□□ -0.52
LMNA-217ENST00000498722 MORN3Q6PF18 240 aaPredicted RBP11.8□□□□□ -0.52
LMNA-217ENST00000498722 RNF183Q96D59 192 aa11.8□□□□□ -0.52
LMNA-217ENST00000498722 TMSB15BA0A087X1C1 80 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 H3BMM0 161 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 HLA-DRB4P13762 266 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 NDUFA6P56556 154 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 NUTF2P61970 127 aaKnown RBP11.79□□□□□ -0.52
LMNA-217ENST00000498722 FER1L6-AS1Q8NA97 138 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 TP53TG1Q9Y2A0 90 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 HLA-DRB4X5D2U9 266 aa11.79□□□□□ -0.52
LMNA-217ENST00000498722 C5orf52A6NGY3 159 aa11.78□□□□□ -0.52
LMNA-217ENST00000498722 KLLNB2CW77 178 aa11.78□□□□□ -0.52
LMNA-217ENST00000498722 F2Z2F3 143 aa11.77□□□□□ -0.53
LMNA-217ENST00000498722 APCSP02743 223 aa11.77□□□□□ -0.53
LMNA-217ENST00000498722 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
LMNA-217ENST00000498722 CTRLP40313 264 aa11.77□□□□□ -0.53
LMNA-217ENST00000498722 CAMPP49913 170 aa11.77□□□□□ -0.53
LMNA-217ENST00000498722 SNRPEP62304 92 aaKnown RBP11.77□□□□□ -0.53
LMNA-217ENST00000498722 PRR9Q5T870 116 aa11.77□□□□□ -0.53
LMNA-217ENST00000498722 LYZL1Q6UWQ5 148 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms