RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 LINC01619G3V211 115 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 LINC00614P0C842 121 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 IGLC6P0CF74 106 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 CKS2P33552 79 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 ASIPP42127 132 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 CRIP1P50238 77 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 SPANXN1Q5VSR9 72 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 LCNL1Q6ZST4 164 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 KLHDC1Q8N7A1 406 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 RNF152Q8N8N0 203 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 OR8A1Q8NGG7 326 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 PRSS3P2Q8NHM4 247 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 DYNLRB2Q8TF09 96 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 ZNF418Q8TF45 676 aaPredicted RBP5.26□□□□□ -1.57
USP39-219ENST00000496047 C4orf3Q8WVX3 66 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 PRELID3AQ96N28 172 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 ODF3Q96PU9 254 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 MAP1LC3AQ9H492 121 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 YAE1D1Q9NRH1 226 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 C19orf73Q9NVV2 129 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 TP53TG3Q9ULZ0 132 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 APCP25054 2843 aa5.26□□□□□ -1.57
USP39-219ENST00000496047 IGHV4OR15-8A0A075B7B6 117 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 A0A087WW49 117 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 TRAV2A0A0B4J234 112 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 PRAC2D3DTV9 90 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 SOCS3O14543 225 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 LEPROTL1O95214 131 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 FRMD6-AS1P0C7T7 363 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 BTF3P20290 206 aaKnown RBP5.25□□□□□ -1.57
USP39-219ENST00000496047 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
USP39-219ENST00000496047 GDF5OSQ5U4N7 250 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 FAM104BQ5XKR9 115 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 NIT1Q86X76 327 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 WFDC11Q8NEX6 87 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 OR10AG1Q8NH19 301 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 MYOZ3Q8TDC0 251 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 RCHY1Q96PM5 261 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 MAP1LC3CQ9BXW4 147 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 CNFNQ9BYD5 112 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
USP39-219ENST00000496047 CCDC168Q8NDH2 2452 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 TMEM213A2RRL7 107 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 DNAJC9-AS1A6NH13 148 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 HSBP1L1C9JCN9 74 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 D6R8Y8 96 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 PPP1R17O96001 155 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 DDTP30046 118 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 ZNF80P51504 273 aaPredicted RBP5.24□□□□□ -1.57
USP39-219ENST00000496047 SYNJ2BPP57105 145 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 FAM159AQ6UWV7 190 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 Q6ZWC4 215 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 KLHL30-AS1Q8NEE0 82 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 DUX5Q96PT3 197 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 TMEM70Q9BUB7 260 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 TMEM160Q9NX00 188 aa5.24□□□□□ -1.57
USP39-219ENST00000496047 C2orf70A6NJV1 201 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 SNAI2O43623 268 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 NUPR1O60356 82 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 CSN3P07498 182 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 SMIM17P0DL12 118 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 LINC00310P59036 64 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 PSMG4Q5JS54 123 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 TEX43Q6ZNM6 134 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 FOXI2Q6ZQN5 318 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 AMN1Q8IY45 258 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 FAM19A2Q8N3H0 131 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 SYT8Q8NBV8 401 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 DCANP1Q8TF63 244 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 C20orf173Q96LM9 149 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 AP1S3Q96PC3 154 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 MS4A6AQ9H2W1 248 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 PRO1933Q9H354 126 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 NXT2Q9NPJ8 142 aaKnown RBP5.23□□□□□ -1.57
USP39-219ENST00000496047 PHLDA3Q9Y5J5 127 aa5.23□□□□□ -1.57
USP39-219ENST00000496047 AKAP9Q99996 3911 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 IGHV1-24A0A0C4DH33 117 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 KIR2DL5BA0A0G2JN68 375 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 KIR2DL5BA0A0G2JPC4 375 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 C7orf71A4D174 169 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 OR4C46A6NHA9 309 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 H3BVH4 76 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 J3KRW8 73 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 ZNF561-AS1K7EIQ3 104 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 K7EQG2 157 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 TCF21O43680 179 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 HBDP02042 147 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 ZNF688P0C7X2 276 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 C3orf79P0CE67 100 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 PRB4P10163 310 aaPredicted RBP5.22□□□□□ -1.57
USP39-219ENST00000496047 SRD5A1P18405 259 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 RNASE4P34096 147 aaKnown RBP5.22□□□□□ -1.57
USP39-219ENST00000496047 TFPI2P48307 235 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 SSTP61278 116 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 MRPL51Q4U2R6 128 aaKnown RBP5.22□□□□□ -1.57
USP39-219ENST00000496047 TCTEX1D4Q5JR98 221 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 PET117Q6UWS5 81 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms