RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 H3BUX3 64 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 IFI27P40305 119 aaPredicted RBP11.32□□□□□ -0.6
CHTOP-206ENST00000495554 LY6EQ16553 131 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 USMG5Q96IX5 58 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 PSMG3-AS1Q96PY0 264 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 A0A096LNT2 108 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 A6NDX4 124 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 PPIFP30405 207 aaKnown RBP11.32□□□□□ -0.6
CHTOP-206ENST00000495554 TSPOP30536 169 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 UFC1Q9Y3C8 167 aa11.32□□□□□ -0.6
CHTOP-206ENST00000495554 GATA3P23771 443 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 DSCR9P59020 149 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
CHTOP-206ENST00000495554 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 ST20Q9HBF5 79 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
CHTOP-206ENST00000495554 A1L4Q6 167 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 F8WDY8 70 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 NDUFA4O00483 81 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 CKS2P33552 79 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 ZNF747Q9BV97 191 aa11.31□□□□□ -0.6
CHTOP-206ENST00000495554 C16orf92Q96LL3 132 aa11.3□□□□□ -0.6
CHTOP-206ENST00000495554 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
CHTOP-206ENST00000495554 TIMM8BQ9Y5J9 83 aaPredicted RBP11.3□□□□□ -0.6
CHTOP-206ENST00000495554 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
CHTOP-206ENST00000495554 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 COX6B1P14854 86 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 LINC01545Q5VT33 79 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 Q6ZS46 218 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 TRBV12-3P01733 135 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 SLC25A16P16260 332 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 BLCAPP62952 87 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 ZANQ9Y493 2812 aa11.29□□□□□ -0.6
CHTOP-206ENST00000495554 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
CHTOP-206ENST00000495554 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
CHTOP-206ENST00000495554 A0A096LNJ9 63 aa11.27□□□□□ -0.6
CHTOP-206ENST00000495554 NPYP01303 97 aa11.27□□□□□ -0.6
CHTOP-206ENST00000495554 LOXL1Q08397 574 aaPredicted RBP11.27□□□□□ -0.6
CHTOP-206ENST00000495554 RNF185Q96GF1 192 aa11.27□□□□□ -0.6
CHTOP-206ENST00000495554 hDV102S1A0JD36 115 aa11.27□□□□□ -0.61
CHTOP-206ENST00000495554 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.61
CHTOP-206ENST00000495554 KLK15Q9H2R5 256 aa11.27□□□□□ -0.61
CHTOP-206ENST00000495554 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.61
CHTOP-206ENST00000495554 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.61
CHTOP-206ENST00000495554 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 SMKR1H3BMG3 65 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 MAPK1IP1LQ8NDC0 245 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 IGHV3-11P01762 117 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
CHTOP-206ENST00000495554 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
CHTOP-206ENST00000495554 NCR2O95944 276 aa11.25□□□□□ -0.61
CHTOP-206ENST00000495554 HBDP02042 147 aa11.25□□□□□ -0.61
CHTOP-206ENST00000495554 GPHB5Q86YW7 130 aa11.25□□□□□ -0.61
CHTOP-206ENST00000495554 C20orf173Q96LM9 149 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 MAP1LC3AQ9H492 121 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 SOCS3O14543 225 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 OR8A1Q8NGG7 326 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
CHTOP-206ENST00000495554 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 OVOL1O14753 267 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
CHTOP-206ENST00000495554 FOXE3Q13461 319 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 PTH2Q96A98 100 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 PMCHL2Q9BQD1 86 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 TMEM160Q9NX00 188 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 CFHR3Q02985 330 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 OR10J6PQ8NGY7 276 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 DEFB112Q30KQ8 113 aa11.23□□□□□ -0.61
CHTOP-206ENST00000495554 NXT2Q9NPJ8 142 aaKnown RBP11.23□□□□□ -0.61
CHTOP-206ENST00000495554 TNFRSF6BO95407 300 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 GAGE5Q13069 117 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 GAGE6Q13070 117 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 IGHV4-4A0A075B6R2 117 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 RPL11P62913 178 aaKnown RBP11.22□□□□□ -0.61
CHTOP-206ENST00000495554 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 ERASQ7Z444 233 aa11.22□□□□□ -0.61
CHTOP-206ENST00000495554 DAZ1Q9NQZ3 744 aaKnown RBP11.22□□□□□ -0.61
CHTOP-206ENST00000495554 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 EVI2AP22794 236 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 CACNG7P62955 275 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 LGALS9BQ3B8N2 356 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms