RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GYPEP15421 78 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 ZNF80P51504 273 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-208ENST00000494728 MRPL23Q16540 153 aaKnown RBP7.9□□□□□ -1.14
VTI1A-208ENST00000494728 ACOT6Q3I5F7 207 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-208ENST00000494728 Q5BKY6 102 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 FAM159AQ6UWV7 190 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 PQLC2Q6ZP29 291 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 HSD17B11Q8NBQ5 300 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 SH3BGRL3Q9H299 93 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-208ENST00000494728 NEGR1Q7Z3B1 354 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 IQCF2Q8IXL9 164 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 Q8N1X5 172 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 TMEM75Q8N9X5 138 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 OR10G9Q8NGN4 311 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 OR10G7Q8NGN6 311 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 CMTM2Q8TAZ6 248 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 SPXQ9BT56 116 aa7.89□□□□□ -1.15
VTI1A-208ENST00000494728 TRAV4A0A0B4J268 109 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 GGTLC3B5MD39 225 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 IGLV2-11P01706 119 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 STAG3L2P0CL84 134 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 STAG3L3P0CL85 134 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 ATP6V0CP27449 155 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 SRIP30626 198 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 CDC34P49427 236 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-208ENST00000494728 SLAQ13239 276 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 DPPA3Q6W0C5 159 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 OR2G3Q8NGZ4 309 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 TREM1Q9NP99 234 aa7.88□□□□□ -1.15
VTI1A-208ENST00000494728 TRAV21A0A0B4J279 112 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 A0A1W2PPV4 95 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 M0R2P5 195 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 GCHFRP30047 84 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 SUN5Q8TC36 379 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 AQP10Q96PS8 301 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 SCRT2Q9NQ03 307 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 LY96Q9Y6Y9 160 aa7.87□□□□□ -1.15
VTI1A-208ENST00000494728 A0A087WTM6 91 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 RNF222A6NCQ9 220 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 TCRAP04437 139 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 GATA1P15976 413 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-208ENST00000494728 RGS21Q2M5E4 152 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 FAM74A1Q5RGS3 127 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 OR4C5Q8NGB2 326 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 PCNPQ8WW12 178 aaKnown RBP7.86□□□□□ -1.15
VTI1A-208ENST00000494728 ASB13Q8WXK3 278 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 PSMG3Q9BT73 122 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-208ENST00000494728 SDF2L1Q9HCN8 221 aa7.86□□□□□ -1.15
VTI1A-208ENST00000494728 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-208ENST00000494728 C9JCJ5 164 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 ORM1P02763 201 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 ERVFC1-1P60608 527 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 ZNF726P1Q15940 193 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 ARL6IP6Q8N6S5 226 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 C5orf17Q8NAS9 161 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 C9orf85Q96MD7 179 aa7.85□□□□□ -1.15
VTI1A-208ENST00000494728 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 G3V3Q6 166 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 GCGP01275 180 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
VTI1A-208ENST00000494728 KRTAP10-1P60331 282 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 CFAP126Q5VTH2 177 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 RPL7L1Q6DKI1 246 aaKnown RBP7.84□□□□□ -1.15
VTI1A-208ENST00000494728 SLC25A29Q8N8R3 303 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 LINC00479Q96M42 142 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 MED28Q9H204 178 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 MSRB1Q9NZV6 116 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 PSG8Q9UQ74 426 aa7.84□□□□□ -1.15
VTI1A-208ENST00000494728 TRAV34A0A0B4J273 112 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 RS1O15537 224 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 XGP55808 180 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 SUMO1P63165 101 aaKnown RBP7.83□□□□□ -1.16
VTI1A-208ENST00000494728 FLI1Q01543 452 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-208ENST00000494728 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 ZNF506Q5JVG8 444 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 Q6ZSN1 163 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 PRNTQ86SH4 94 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 Q8N3U1 123 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 NHLRC2Q8NBF2 726 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 KCNS1Q96KK3 526 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 TXNDC17Q9BRA2 123 aa7.83□□□□□ -1.16
VTI1A-208ENST00000494728 PGPEP1LA6NFU8 196 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 FBLL1A6NHQ2 334 aaKnown RBP7.82□□□□□ -1.16
VTI1A-208ENST00000494728 CRYGDP07320 174 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
VTI1A-208ENST00000494728 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 CYB561D1Q8N8Q1 229 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 NDFIP1Q9BT67 221 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 Q9UF83 564 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
VTI1A-208ENST00000494728 IGKV3D-20A0A0C4DH25 116 aa7.81□□□□□ -1.16
VTI1A-208ENST00000494728 SERTM2A0A1B0GWG4 89 aa7.81□□□□□ -1.16
VTI1A-208ENST00000494728 CXorf1O96002 111 aa7.81□□□□□ -1.16
VTI1A-208ENST00000494728 GIPP09681 153 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-208ENST00000494728 EVI2AP22794 236 aa7.81□□□□□ -1.16
VTI1A-208ENST00000494728 HAMPP81172 84 aa7.81□□□□□ -1.16
VTI1A-208ENST00000494728 SERF2P84101 59 aa7.81□□□□□ -1.16
VTI1A-208ENST00000494728 TNFSF18Q9UNG2 199 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms