RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 MGST2Q99735 147 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 NABP2Q9BQ15 211 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 TMEM126AQ9H061 195 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 ZNF492Q9P255 531 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 IGHV7-81A0A0B4J1V7 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 RRHO14718 337 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 SPINT2O43291 252 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GAGE7O76087 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 PSMB8P28062 276 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
HDAC6-234ENST00000493923 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GAGE4Q13068 117 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 FOXE3Q13461 319 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 RPL39P5Q59GN2 51 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 Q6Q795 121 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 Q6ZUT4 128 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 MYOZ3Q8TDC0 251 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 RASL11BQ9BPW5 248 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
HDAC6-234ENST00000493923 LSM4Q9Y4Z0 139 aaKnown RBP6.27□□□□□ -1.41
HDAC6-234ENST00000493923 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 RYR2Q92736 4967 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 LINC01619G3V211 115 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 PROP1O75360 226 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 SAA2P0DJI9 122 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 EGR2P11161 476 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 FCGR2BP31994 310 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 KIR2DS2P43631 304 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 RPL30P62888 115 aaKnown RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 SLC35B1P78383 322 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 FOXI1Q12951 378 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 FHL3Q13643 280 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 PSG5Q15238 335 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 IZUMO4Q1ZYL8 232 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 C19orf54Q5BKX5 351 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 MIC13Q5XKP0 118 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 RBPMS2Q6ZRY4 209 aaKnown RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 ZNF833PQ6ZTB9 187 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 STPG3Q8N7X2 389 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 CACNG8Q8WXS5 425 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 HSD17B10Q99714 261 aaKnown RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 B9D2Q9BPU9 175 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 SLC25A2Q9BXI2 301 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
HDAC6-234ENST00000493923 TENM2Q9NT68 2774 aa6.26□□□□□ -1.41
HDAC6-234ENST00000493923 STARD9Q9P2P6 4700 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 HIGD1CA8MV81 97 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 IGLV2-14P01704 120 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 IGF1P05019 195 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 ELANEP08246 267 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 ASIPP42127 132 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 ERVK-16P61578 105 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 RIGQ13278 110 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 ODF1Q14990 250 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 POU2AF1Q16633 256 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 GCSAMLQ5JQS6 135 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 GDF5OSQ5U4N7 250 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 ZNF491Q8N8L2 437 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 GPHA2Q96T91 129 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 ASCL2Q99929 193 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 FBXL15Q9H469 300 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 UFC1Q9Y3C8 167 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
HDAC6-234ENST00000493923 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 FBLL1A6NHQ2 334 aaKnown RBP6.24□□□□□ -1.41
HDAC6-234ENST00000493923 IGLL5B9A064 214 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 NBR2O15453 112 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 NDUFA3O95167 84 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 C8orf88P0DMB2 117 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 GCSHP23434 173 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 CAMPP49913 170 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 CD69Q07108 199 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 WFDC2Q14508 124 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 ETDBQ3ZM63 59 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 Q6AWC8 147 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 TRAT1Q6PIZ9 186 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 CEND1Q8N111 149 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 SYT8Q8NBV8 401 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 NPBQ8NG41 125 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 C4orf3Q8WVX3 66 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 IL1F10Q8WWZ1 152 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 HINT2Q9BX68 163 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 MAP1LC3AQ9H492 121 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 ENY2Q9NPA8 101 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms