RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 C4orf22Q6V702 233 aa2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 LRRC34Q8IZ02 419 aa2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 PACRGLQ8N7B6 248 aa2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 RASSF5Q8WWW0 418 aa2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 SMDT1Q9H4I9 107 aa2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 BABAM2Q9NXR7 383 aa2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 MRPL27Q9P0M9 148 aaKnown RBP2.29□□□□□ -2.04
SSX2IP-208ENST00000490476 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 IGHV3-73A0A0B4J1V6 119 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 TRAV5A0A0B4J249 113 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 CTSDP07339 412 aaPredicted RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 AP2S1P53680 142 aaPredicted RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 MEF2BQ02080 365 aaPredicted RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 RPL18Q07020 188 aaKnown RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 GRK1Q15835 563 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 TPRXLQ17RH7 258 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 SAPCD1Q5SSQ6 148 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 ZNF322Q6U7Q0 402 aaPredicted RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 AMTNQ6UX39 209 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 GPHB5Q86YW7 130 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 GNPNAT1Q96EK6 184 aaPredicted RBP2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 AMELYQ99218 206 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 MND1Q9BWT6 205 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 CHST6Q9GZX3 395 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 C11orf1Q9H5F2 150 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 HES4Q9HCC6 221 aa2.28□□□□□ -2.04
SSX2IP-208ENST00000490476 DHRS12A0PJE2 317 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 SMIM9A6NGZ8 99 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 M0R135 149 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 NDUFA3O95167 84 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 NPPCP23582 126 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 CRHBPP24387 322 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 CRYBB3P26998 211 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 ATP5G3P48201 142 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 LSM6P62312 80 aaKnown RBP2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 PRDX4Q13162 271 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 PLGLAQ15195 96 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 IMPG1Q17R60 797 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 TDRG1Q3Y452 100 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 HIST2H3AQ71DI3 136 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 RPS27LQ71UM5 84 aaKnown RBP2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 LINC00471Q8N535 108 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 UBL4BQ8N7F7 174 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 RNF133Q8WVZ7 376 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 AQP3Q92482 292 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 C20orf166-AS1Q96NR2 134 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 FKBP14Q9NWM8 211 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 COA4Q9NYJ1 87 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 MPC1Q9Y5U8 109 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 LY96Q9Y6Y9 160 aa2.27□□□□□ -2.05
SSX2IP-208ENST00000490476 A0A0J9YX75 114 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 ZNF705FA8MVS1 300 aaPredicted RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 EVPLLA8MZ36 301 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 K7EP13 123 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 NOS1APO75052 506 aaPredicted RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 MT-CO2P00403 227 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 ZNF705DP0CH99 300 aaPredicted RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 ZNF705BP0CI00 300 aaPredicted RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 ERP29P30040 261 aaKnown RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 TCL1AP56279 114 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 DEFB131AP59861 70 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 ARPC4P59998 168 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 HIST1H3AP68431 136 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 CLVS2Q5SYC1 327 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 HIST2H3PS2Q5TEC6 136 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 ZNF705AQ6ZN79 300 aaPredicted RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 STX12Q86Y82 276 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 C10orf67Q8IYJ2 551 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 DAND5Q8N907 189 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 OR2D3Q8NGH3 330 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 GRPEL2Q8TAA5 225 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 C1orf54Q8WWF1 131 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 PTH2Q96A98 100 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 C9orf16Q9BUW7 83 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 PARD6GQ9BYG4 376 aaPredicted RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 MRPS26Q9BYN8 205 aaKnown RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 OR51I2Q9H344 312 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 TXNL4BQ9NX01 149 aaKnown RBP2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 LHFPL6Q9Y693 200 aa2.26□□□□□ -2.05
SSX2IP-208ENST00000490476 OR2T8A6NH00 312 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 SMIM23A6NLE4 172 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 H7C1C5 153 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 J3QRE1 110 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 SLC17A3O00476 420 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 KPNA4O00629 521 aaPredicted RBP2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 BANF1O75531 89 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 RPS17P08708 135 aaKnown RBP2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 ASAH2BP0C7U1 165 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 DEFB130BP0DP73 79 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 DEFB130AP0DP74 79 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 SPRR2EP22531 72 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 EVI2AP22794 236 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 DDTP30046 118 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 SPRR2BP35325 72 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 SPRR2AP35326 72 aa2.25□□□□□ -2.05
SSX2IP-208ENST00000490476 MAGOHP61326 146 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms