RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 MAP1LC3BQ9GZQ8 125 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 TP53TG3Q9ULZ0 132 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 KLF12Q9Y4X4 402 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 LENEPQ9Y5L5 61 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 OR7C2O60412 319 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 GPX1P07203 203 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 OR10J4P0C629 311 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 BTF3P20290 206 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 TMEM78Q5T7P6 136 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 SFT2D1Q8WV19 159 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 TMPRSS5Q9H3S3 457 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 Q9H8V8 135 aa6.72□□□□□ -1.33
TMEM39A-210ENST00000490099 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 A0A096LPF7 62 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 IFNA1P01562 189 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 FHITP49789 147 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 RANP62826 216 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 ZNF726P1Q15940 193 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 C6orf223Q8N319 242 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 Q9H3A6 140 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 TMEM167BQ9NRX6 74 aa6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 MRPS16Q9Y3D3 137 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-210ENST00000490099 A0A0J9YY99 117 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 DIRC3C9JPN6 131 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 ARL14EPLP0DKL9 152 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 CSN1S1P47710 185 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 UBE2L3P68036 154 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 TDRG1Q3Y452 100 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 Q6AWC8 147 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 IQCF2Q8IXL9 164 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 LYPD6BQ8NI32 183 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 Q8TAT8 98 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 MANBALQ9NQG1 85 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 OTORQ9NRC9 128 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
TMEM39A-210ENST00000490099 TRGV2A0A075B6R0 118 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 TRGV1A0A0A0MS02 117 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 HMGB3O15347 200 aaKnown RBP6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 GCHFRP30047 84 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 FHL2Q14192 279 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 SUN5Q8TC36 379 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 RASL10AQ92737 203 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 MDFICQ9P1T7 246 aa6.69□□□□□ -1.34
TMEM39A-210ENST00000490099 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 A0A1B0GV50 99 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 CRYBA4P53673 196 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 FGF8P55075 233 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 SLAQ13239 276 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 NDUFA5Q16718 116 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 TTC32Q5I0X7 151 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 TVP23CQ96ET8 276 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 TXNDC17Q9BRA2 123 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 NKX6-2Q9C056 277 aaPredicted RBP6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 MED9Q9NWA0 146 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
TMEM39A-210ENST00000490099 PGPA6NDG6 321 aa6.67□□□□□ -1.34
TMEM39A-210ENST00000490099 Q8N3U1 123 aa6.67□□□□□ -1.34
TMEM39A-210ENST00000490099 PCNPQ8WW12 178 aaKnown RBP6.67□□□□□ -1.34
TMEM39A-210ENST00000490099 SPXQ9BT56 116 aa6.67□□□□□ -1.34
TMEM39A-210ENST00000490099 GNG13Q9P2W3 67 aa6.67□□□□□ -1.34
TMEM39A-210ENST00000490099 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
TMEM39A-210ENST00000490099 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 RAB19A4D1S5 217 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 PAX4O43316 350 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 EIF3GO75821 320 aaKnown RBP eCLIP6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 BCL2P10415 239 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 ZNF415Q09FC8 603 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 FAM210AQ96ND0 272 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 TCEAL7Q9BRU2 100 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 EIF5A2Q9GZV4 153 aaKnown RBP6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 SMDT1Q9H4I9 107 aa6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 MRPL16Q9NX20 251 aaKnown RBP6.66□□□□□ -1.34
TMEM39A-210ENST00000490099 RYR1P21817 5038 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 CDK2AP2O75956 126 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 PEA15Q15121 130 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 MRPL23Q16540 153 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 MUC21Q5SSG8 566 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 UQCC3Q6UW78 93 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 LYPD5Q6UWN5 251 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 ICOSQ9Y6W8 199 aa6.65□□□□□ -1.34
TMEM39A-210ENST00000490099 TRGV11A0A075B6L2 103 aa6.64□□□□□ -1.35
TMEM39A-210ENST00000490099 TRAV8-1A0A0A6YYK1 113 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms