RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 HLA-DMBP28068 263 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 UBE2E1P51965 193 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 EIF4EBP1Q13541 118 aaPredicted RBP2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 KRTAP13-3Q3SY46 172 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 DEFB121Q5J5C9 76 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 ZNF493Q6ZR52 646 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 PDPNQ86YL7 162 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 C3orf22Q8N5N4 141 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 IFI27L1Q96BM0 104 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 UBE2E2Q96LR5 201 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 ZNF488Q96MN9 340 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 HSD17B10Q99714 261 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 NAA38Q9BRA0 125 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 OR2H1Q9GZK4 316 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 RNASE7Q9H1E1 156 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 NHP2Q9NX24 153 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 DEC1Q9P2X7 70 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 PRO0628Q9UI54 55 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 HHLA3Q9XRX5 114 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
ECHDC1-217ENST00000488087 KIAA2026Q5HYC2 2103 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 THADAQ6YHU6 1953 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 TRBV25-1A0A075B6N4 114 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 A0A096LNJ9 63 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKV1D-43A0A0B4J1Z2 117 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 TRAV4A0A0B4J268 109 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKV1-12A0A0C4DH73 117 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 IGHV3-64DA0A0J9YX35 117 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 ZNF816-ZNF321PA0A0X1KG74 233 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 MYMXA0A1B0GTQ4 84 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 HIGD1CA8MV81 97 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 OVOL1O14753 267 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 NPYP01303 97 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKV1D-12P01611 117 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 HBDP02042 147 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 CLPSP04118 112 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 IL4P05112 153 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 ACYP1P07311 99 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 LGALS1P09382 135 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 CISD3P0C7P0 127 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 SCGB1C2P0DMR2 95 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 LINC00694P0DN24 101 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 RPL7P18124 248 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 CNTFRP26992 372 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 GLRXP35754 106 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 UBE2D1P51668 147 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 TMEM258P61165 79 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 FGF12P61328 243 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 HERVK_113P61574 105 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 HSPE1P61604 102 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 EBI3Q14213 229 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 FXYD3Q14802 87 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 DEFB134Q4QY38 66 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 C10orf128Q5T292 105 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 Q6ZR03 302 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 Q6ZT83 130 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 PCP2Q8IVA1 136 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 C15orf53Q8NAA6 179 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 SLC37A2Q8TED4 501 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 SPTSSAQ969W0 71 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 BORCS8Q96FH0 119 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 RNF185Q96GF1 192 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 MGST2Q99735 147 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 ZNF442Q9H7R0 627 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 ENY2Q9NPA8 101 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 C21orf62Q9NYP8 219 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 DOCK9Q9BZ29 2069 aa2.45□□□□□ -2.02
ECHDC1-217ENST00000488087 COL4A5P29400 1685 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 TNRC6AQ8NDV7 1962 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 IGKV1-27A0A075B6S5 117 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 F6UB75 175 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 K7ERJ3 54 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 RTL8CO15255 209 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 SPINK4O60575 86 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 PRB2P02812 416 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 CECR9P0C854 216 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 P0DMU3 169 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 FAM231AP0DMU4 169 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 FAM231CP0DMU5 169 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 CRYGSP22914 178 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 MYCNOSP40205 109 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 CXCL5P42830 114 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 EMP1P54849 157 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 EDDM3BP56851 147 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 HERVK_113P63121 156 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 RPS21P63220 83 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 CST6Q15828 149 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 RSPO1Q2MKA7 263 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 PIGYQ3MUY2 71 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 OR4C13Q8NGP0 309 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 ODF3Q96PU9 254 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 TRGV9Q99603 122 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 PRORYQ9H606 182 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 ZNF355PQ9NSJ1 428 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 AMMECR1Q9Y4X0 333 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 CHCHD2Q9Y6H1 151 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 HEATR5BQ9P2D3 2071 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 DOCK3Q8IZD9 2030 aa2.44□□□□□ -2.02
ECHDC1-217ENST00000488087 DOCK8Q8NF50 2099 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms