RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 C11orf21Q9P2W6 132 aa8.52□□□□□ -1.05
MSH5-216ENST00000484309 FAT2Q9NYQ8 4349 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 A0A096LPF7 62 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 IGHV3-16A0A0C4DH30 117 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 A0A1B0GV50 99 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 FAM74A7A6NL05 159 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 FAM3BP58499 235 aaPredicted RBP8.51□□□□□ -1.05
MSH5-216ENST00000484309 ESRGQ1W209 222 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 TDRG1Q3Y452 100 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 ZFP69Q49AA0 526 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 LINC00336Q6ZUF6 198 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 ZNF479Q96JC4 524 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 SDF2L1Q9HCN8 221 aa8.51□□□□□ -1.05
MSH5-216ENST00000484309 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 KANTRA0A1W2PQU2 76 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 HMSDA8MTL9 139 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 H3BNG1 76 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 PEX7O00628 323 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 PAX4O43316 350 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 BCL2L11O43521 198 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 FHL2Q14192 279 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 SMUG1Q53HV7 270 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 SPXQ9BT56 116 aa8.5□□□□□ -1.05
MSH5-216ENST00000484309 A0A0D9SG52 128 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 CRYBA4P53673 196 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 Q86TA4 180 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 FAM213BQ8TBF2 198 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 PRO0255Q9UI72 69 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 HHLA3Q9XRX5 114 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 ICOSQ9Y6W8 199 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 ARL2-SNX15V9GYD0 113 aa8.49□□□□□ -1.05
MSH5-216ENST00000484309 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 C9JCJ5 164 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 M0R2P5 195 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 PFDN1O60925 122 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 PFN1P07737 140 aaKnown RBP8.48□□□□□ -1.05
MSH5-216ENST00000484309 CST9LP1Q5W188 147 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 TMUB2Q71RG4 321 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 RASL10AQ92737 203 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 Q9H8V8 135 aa8.48□□□□□ -1.05
MSH5-216ENST00000484309 MRPS16Q9Y3D3 137 aaKnown RBP8.48□□□□□ -1.05
MSH5-216ENST00000484309 SEC11BP0C7V7 166 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 PPT1P50897 306 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 SOHLH1Q5JUK2 328 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 SAPCD1Q5SSQ6 148 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 OR4C5Q8NGB2 326 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 STOML3Q8TAV4 291 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 SFT2D1Q8WV19 159 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
MSH5-216ENST00000484309 TRAV4A0A0B4J268 109 aa8.46□□□□□ -1.06
MSH5-216ENST00000484309 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
MSH5-216ENST00000484309 PAGE4O60829 102 aa8.46□□□□□ -1.06
MSH5-216ENST00000484309 UBE2G1P62253 170 aa8.46□□□□□ -1.06
MSH5-216ENST00000484309 C6orf223Q8N319 242 aa8.46□□□□□ -1.06
MSH5-216ENST00000484309 HIST1H2BAQ96A08 127 aa8.46□□□□□ -1.06
MSH5-216ENST00000484309 NKX6-2Q9C056 277 aaPredicted RBP8.46□□□□□ -1.06
MSH5-216ENST00000484309 PKD1P98161 4303 aa8.46□□□□□ -1.06
MSH5-216ENST00000484309 hCG_2014768A0A024R1R8 64 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 IGKV3D-20A0A0C4DH25 116 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 TPT1P13693 172 aaKnown RBP8.45□□□□□ -1.06
MSH5-216ENST00000484309 GYPEP15421 78 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 SLAQ13239 276 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 ZC2HC1AQ96GY0 325 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 C9orf85Q96MD7 179 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 UPK3BQ9BT76 320 aa8.45□□□□□ -1.06
MSH5-216ENST00000484309 IGHV3-73A0A0B4J1V6 119 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 UMAD1C9J7I0 102 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 K7EQD1 137 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 M0R036 132 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 NXPH4O95158 308 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
MSH5-216ENST00000484309 SRIP30626 198 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 AKR1C3P42330 323 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 TNP2Q05952 138 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 MRPL23Q16540 153 aaKnown RBP8.44□□□□□ -1.06
MSH5-216ENST00000484309 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 PCNPQ8WW12 178 aaKnown RBP8.44□□□□□ -1.06
MSH5-216ENST00000484309 MBD3L1Q8WWY6 194 aa8.44□□□□□ -1.06
MSH5-216ENST00000484309 FABP5P3A8MUU1 101 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 SH2D1AO60880 128 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 ORM1P02763 201 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
MSH5-216ENST00000484309 CRIP1P50238 77 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 EIF5AP63241 154 aaKnown RBP8.43□□□□□ -1.06
MSH5-216ENST00000484309 LGALSLQ3ZCW2 172 aaPredicted RBP8.43□□□□□ -1.06
MSH5-216ENST00000484309 LYPD5Q6UWN5 251 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 Q6ZNX1 250 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 NEGR1Q7Z3B1 354 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 FMC1Q96HJ9 113 aa8.43□□□□□ -1.06
MSH5-216ENST00000484309 TMSB15BA0A087X1C1 80 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms