RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 AMTNQ6UX39 209 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
CLK3-204ENST00000483723 NF1P21359 2839 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 SNAI2O43623 268 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 OR5AL1P0C617 328 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 SRIP30626 198 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 AKR1D1P51857 326 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 DEFB131AP59861 70 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 TMEM256Q8N2U0 113 aa10.43□□□□□ -0.74
CLK3-204ENST00000483723 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
CLK3-204ENST00000483723 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
CLK3-204ENST00000483723 LOC102724200A0A096LPH7 203 aaPredicted RBP10.42□□□□□ -0.74
CLK3-204ENST00000483723 OR4C46A6NHA9 309 aa10.42□□□□□ -0.74
CLK3-204ENST00000483723 LINC00310P59036 64 aa10.42□□□□□ -0.74
CLK3-204ENST00000483723 NSUN5P1Q3KNT7 163 aa10.42□□□□□ -0.74
CLK3-204ENST00000483723 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
CLK3-204ENST00000483723 TPPP3Q9BW30 176 aa10.42□□□□□ -0.74
CLK3-204ENST00000483723 J3KRW8 73 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 NUPR1O60356 82 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
CLK3-204ENST00000483723 HLA-DRB4P13762 266 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 NTF3P20783 257 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 HLA-DRB4X5D2U9 266 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 H3BMM0 161 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 TSPOP30536 169 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 ANXA2RQ3ZCQ2 193 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 C18orf32Q8TCD1 76 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 HIST1H2BLQ99880 126 aa10.41□□□□□ -0.74
CLK3-204ENST00000483723 C7orf71A4D174 169 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 AMBPP02760 352 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 S100A2P29034 98 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 CDKN1BP46527 198 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 PDZD11Q5EBL8 140 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 FAM104BQ5XKR9 115 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 OR2K2Q8NGT1 345 aa10.4□□□□□ -0.74
CLK3-204ENST00000483723 AGRNO00468 2067 aa10.4□□□□□ -0.75
CLK3-204ENST00000483723 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
CLK3-204ENST00000483723 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 IGLV1-51P01701 117 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 BAGE3Q86Y29 109 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 LINC00518Q8N0U6 118 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 TMEM191AQ9H0A3 160 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 SCRT2Q9NQ03 307 aa10.39□□□□□ -0.75
CLK3-204ENST00000483723 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 SERF1AO75920 110 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 CACNG7P62955 275 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 TWIST1Q15672 202 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.38□□□□□ -0.75
CLK3-204ENST00000483723 MSRB1Q9NZV6 116 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 U3KQK5 164 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 SORL1Q92673 2214 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 IGKV3-20P01619 116 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 FABP4P15090 132 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 ODF3L2Q3SX64 289 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 PRR31Q5SQ13 230 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 LINC00482Q8N8I6 264 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
CLK3-204ENST00000483723 PACRGQ96M98 296 aaPredicted RBP10.38□□□□□ -0.75
CLK3-204ENST00000483723 TRAV12-3A0A0B4J271 114 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
CLK3-204ENST00000483723 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
CLK3-204ENST00000483723 GNRH2O43555 120 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
CLK3-204ENST00000483723 ASIPP42127 132 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
CLK3-204ENST00000483723 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 OR10D4PQ8NGN7 298 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 OR10AG1Q8NH19 301 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 TMEM18Q96B42 140 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 NAGKQ9UJ70 344 aa10.37□□□□□ -0.75
CLK3-204ENST00000483723 M0R2Z0 102 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
CLK3-204ENST00000483723 SAP30O75446 220 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 RNASE3P12724 160 aaKnown RBP10.36□□□□□ -0.75
CLK3-204ENST00000483723 ZNF124Q15973 351 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 IQCJQ1A5X6 159 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 FAM159AQ6UWV7 190 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 RNF185Q96GF1 192 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 CITED1Q99966 193 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 TRAV12-2A0A075B6T6 113 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 H3BVH4 76 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 SSTP61278 116 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
CLK3-204ENST00000483723 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
CLK3-204ENST00000483723 SMIM6P0DI80 62 aa10.35□□□□□ -0.75
CLK3-204ENST00000483723 RAB4AP20338 218 aa10.35□□□□□ -0.75
CLK3-204ENST00000483723 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
CLK3-204ENST00000483723 NXPH4O95158 308 aa10.34□□□□□ -0.75
CLK3-204ENST00000483723 S100A4P26447 101 aaKnown RBP10.34□□□□□ -0.75
CLK3-204ENST00000483723 WNK1Q9H4A3 2382 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms