RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 SPINK13Q1W4C9 94 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 TRPT1Q86TN4 253 aaKnown RBP7.43□□□□□ -1.22
HDAC6-226ENST00000483656 PGLYRP4Q96LB8 373 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 MCRIP2Q9BUT9 160 aaKnown RBP7.43□□□□□ -1.22
HDAC6-226ENST00000483656 SRD5A3Q9H8P0 318 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 NAT8BQ9UHF3 227 aa7.43□□□□□ -1.22
HDAC6-226ENST00000483656 TRAV12-3A0A0B4J271 114 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 A0A1B0GXF2 115 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 PHOX2AO14813 284 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 RBMY1A1P0DJD3 496 aaKnown RBP7.42□□□□□ -1.22
HDAC6-226ENST00000483656 RBMY1CP0DJD4 496 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 TSPOP30536 169 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 CDKN1BP46527 198 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 RPS10P46783 165 aaKnown RBP7.42□□□□□ -1.22
HDAC6-226ENST00000483656 RBMY1FQ15415 496 aaKnown RBP7.42□□□□□ -1.22
HDAC6-226ENST00000483656 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 MRPL54Q6P161 138 aaKnown RBP7.42□□□□□ -1.22
HDAC6-226ENST00000483656 NOTCH3Q9UM47 2321 aa7.42□□□□□ -1.22
HDAC6-226ENST00000483656 MUC21Q5SSG8 566 aa7.41□□□□□ -1.22
HDAC6-226ENST00000483656 LYZL1Q6UWQ5 148 aa7.41□□□□□ -1.22
HDAC6-226ENST00000483656 TMA7Q9Y2S6 64 aaKnown RBP7.41□□□□□ -1.22
HDAC6-226ENST00000483656 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
HDAC6-226ENST00000483656 XKRY2A2RUG3 117 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 GNRH2O43555 120 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 TRGC2P03986 189 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 GIG44P09565 113 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-226ENST00000483656 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 CTRLP40313 264 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 TMEM136Q6ZRR5 245 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 STHQ8IWL8 128 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 Q8N1Y9 231 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 DEFB125Q8N687 156 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 NAGKQ9UJ70 344 aa7.4□□□□□ -1.22
HDAC6-226ENST00000483656 MUC21A0A0G2JKD1 596 aa7.39□□□□□ -1.23
HDAC6-226ENST00000483656 MUC21A0A140T8X8 626 aa7.39□□□□□ -1.23
HDAC6-226ENST00000483656 TDRG1Q3Y452 100 aa7.39□□□□□ -1.23
HDAC6-226ENST00000483656 DNLZQ5SXM8 178 aa7.39□□□□□ -1.23
HDAC6-226ENST00000483656 ATP5L2Q7Z4Y8 100 aa7.39□□□□□ -1.23
HDAC6-226ENST00000483656 FER1L6-AS1Q8NA97 138 aa7.39□□□□□ -1.23
HDAC6-226ENST00000483656 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-226ENST00000483656 A0A1B0GUT8 65 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 SPRY2O43597 315 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 SNAI2O43623 268 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 RPL35AP18077 110 aaKnown RBP7.38□□□□□ -1.23
HDAC6-226ENST00000483656 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 OXLD1Q5BKU9 147 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 PRR31Q5SQ13 230 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 FRZBQ92765 325 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 TPPP3Q9BW30 176 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 GNB1LQ9BYB4 327 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 CNFNQ9BYD5 112 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 TP53TG3Q9ULZ0 132 aa7.38□□□□□ -1.23
HDAC6-226ENST00000483656 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 IGHV3-16A0A0C4DH30 117 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 C1orf196B1AJZ1 125 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 SNURFLB1AK76 121 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 H3BVH4 76 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 AMBPP02760 352 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 OR5AL1P0C617 328 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
HDAC6-226ENST00000483656 CAMPP49913 170 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 KRTAP10-11P60412 298 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 HBBP68871 147 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 RIGQ13278 110 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 COX19Q49B96 90 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 WDR73Q6P4I2 378 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 ZFP82Q8N141 532 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 C1orf158Q8N1D5 194 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
HDAC6-226ENST00000483656 SCRT2Q9NQ03 307 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 MSRB1Q9NZV6 116 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 XCL2Q9UBD3 114 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 TRAPPC1Q9Y5R8 145 aa7.37□□□□□ -1.23
HDAC6-226ENST00000483656 IGHV4-4A0A075B6R2 117 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 F2Z2F3 143 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 PRM2P04554 102 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 MED14OSP0DP75 135 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 ASIPP42127 132 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 SSTP61278 116 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 GTSCR1Q86UQ5 136 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 C20orf144Q9BQM9 153 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 LINC00467Q9BRT7 94 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 MDFICQ9P1T7 246 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 NOTCH1P46531 2555 aa7.36□□□□□ -1.23
HDAC6-226ENST00000483656 A0A1B0GW15 77 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 INSP01308 110 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 TRGC1P0CF51 173 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 NTF3P20783 257 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 RAB4BP61018 213 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 RAB5BP61020 215 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms