RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 SIGLEC8Q9NYZ4 499 aa11□□□□□ -0.65
CHD3-211ENST00000481999 A0A087X0K7 114 aa11□□□□□ -0.65
CHD3-211ENST00000481999 PSMB8P28062 276 aa11□□□□□ -0.65
CHD3-211ENST00000481999 COX11Q9Y6N1 276 aa11□□□□□ -0.65
CHD3-211ENST00000481999 IGLC6P0CF74 106 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 MRPL51Q4U2R6 128 aaKnown RBP10.99□□□□□ -0.65
CHD3-211ENST00000481999 GPHB5Q86YW7 130 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 ZNF738Q8NE65 137 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
CHD3-211ENST00000481999 PPP1R14DQ9NXH3 145 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
CHD3-211ENST00000481999 TWIST1Q15672 202 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 C20orf173Q96LM9 149 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 U3KQE9 123 aa10.99□□□□□ -0.65
CHD3-211ENST00000481999 LOC389332A0A1B0GUA5 103 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 C18orf65Q6ZTR6 163 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 FAM106AQ4KMX7 169 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 MPV17L2Q567V2 206 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 GLMPQ8WWB7 406 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 USMG5Q96IX5 58 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 SLC50A1Q9BRV3 221 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
CHD3-211ENST00000481999 A0A096LNJ9 63 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 CKS2P33552 79 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 ORM1P02763 201 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 CNFNQ9BYD5 112 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 NPFFR1Q9GZQ6 430 aa10.97□□□□□ -0.65
CHD3-211ENST00000481999 J3KRW8 73 aa10.96□□□□□ -0.65
CHD3-211ENST00000481999 DEFB136Q30KP8 78 aa10.96□□□□□ -0.65
CHD3-211ENST00000481999 F6UB75 175 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 NDUFA4O00483 81 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 TCF21O43680 179 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 NCR2O95944 276 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 NUDT3O95989 172 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 HBDP02042 147 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 C16orf92Q96LL3 132 aa10.96□□□□□ -0.66
CHD3-211ENST00000481999 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 H3BUA1 57 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 PPBPP02775 128 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 COX8AP10176 69 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
CHD3-211ENST00000481999 LINC01559Q495D7 138 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 Q6ZVH6 145 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 DPF1Q92782 380 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 RHPN1-AS1Q9BWJ2 59 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 PEF1Q9UBV8 284 aaKnown RBP10.95□□□□□ -0.66
CHD3-211ENST00000481999 AGRNO00468 2067 aa10.95□□□□□ -0.66
CHD3-211ENST00000481999 A0A0G2JLM5 398 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 NPYP01303 97 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 UBE2V1Q13404 147 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 LGALS9BQ3B8N2 356 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 PRSS57Q6UWY2 283 aa10.94□□□□□ -0.66
CHD3-211ENST00000481999 SMKR1H3BMG3 65 aa10.93□□□□□ -0.66
CHD3-211ENST00000481999 CCL25O15444 150 aa10.93□□□□□ -0.66
CHD3-211ENST00000481999 SMR3AQ99954 134 aa10.93□□□□□ -0.66
CHD3-211ENST00000481999 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
CHD3-211ENST00000481999 MRPL53Q96EL3 112 aaKnown RBP10.93□□□□□ -0.66
CHD3-211ENST00000481999 KRTAP1-1Q07627 177 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 KIR3DS1Q14943 382 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 C11orf44Q8N8P7 122 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 RNF185Q96GF1 192 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 MAP1LC3AQ9H492 121 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
CHD3-211ENST00000481999 MSRB1Q9NZV6 116 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 C11orf21Q9P2W6 132 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 IGHV4OR15-8A0A075B7B6 117 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 A0A087WW49 117 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 BRI3O95415 125 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 SYNJ2BPP57105 145 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 FOXE3Q13461 319 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 PRR9Q5T870 116 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 OR1N2Q8NGR9 330 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 FOXC2Q99958 501 aa10.92□□□□□ -0.66
CHD3-211ENST00000481999 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 IFI27L1Q96BM0 104 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 SOCS3O14543 225 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 CACNG7P62955 275 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 C21orf62-AS1Q17RA5 79 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 HIVEP2P31629 2446 aa10.91□□□□□ -0.66
CHD3-211ENST00000481999 SPRY2O43597 315 aa10.9□□□□□ -0.66
CHD3-211ENST00000481999 LINC01546A6NGU7 62 aa10.9□□□□□ -0.67
CHD3-211ENST00000481999 TAX1BP3O14907 124 aa10.9□□□□□ -0.67
CHD3-211ENST00000481999 FXYD7P58549 80 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms